PDB entry 4oe1

View 4oe1 on RCSB PDB site
Description: crystal structure of the pentatricopeptide repeat protein ppr10 (c256s/c430s/c449s) in complex with an 18-nt psaj rna element
Deposited on 2014-01-11, released 2014-09-24
The last revision was dated 2015-02-18, with a file datestamp of 2015-02-13.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.264
AEROSPACI score: 0.14 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Chloroplast pentatricopeptide repeat protein 10
    Species: Zea mays [TaxId:4577]
    Gene: ppr10, ZEAMMB73_867042
    Database cross-references and differences (RAF-indexed):
    • Uniprot B8Y6I0
      • engineered mutation (187)
      • engineered mutation (361)
      • engineered mutation (380)
  • Chain 'B':
    Compound: Chloroplast pentatricopeptide repeat protein 10
    Species: Zea mays [TaxId:4577]
    Gene: ppr10, ZEAMMB73_867042
    Database cross-references and differences (RAF-indexed):
    • Uniprot B8Y6I0
      • engineered mutation (187)
      • engineered mutation (361)
      • engineered mutation (380)
  • Chain 'C':
    Compound: psaJ RNA
  • Chain 'D':
    Compound: psaJ RNA
  • Heterogens: PO4

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4oe1A (A:)
    hsflspdaqvlvlaisshplptlaaflasrrdellraditsllkalelsghwewalallr
    wagkegaadasalemvvralgregqhdavcalldetplppgsrldvrayttvlhalsrag
    ryeralelfaelrrqgvaptlvtynvvldvygrmgrswprivalldemraagvepdgfta
    stviaacsrdglvdeavaffedlkarghapcvvtynallqvfgkagnytealrvlgemeq
    ngcqpdavtynelagtyaragffeeaarcldtmaskgllpnaftyntvmtaygnvgkvde
    alalfdqmkktgfvpnvntynlvlgmlgkksrftvmlemlgemsrsgctpnrvtwntmla
    vsgkrgmedyvtrvlegmrssgvelsrdtyntliaaygrcgsrtnafkmynemtsagftp
    cittynallnvlsrqgdwstaqsivskmrtkgfkpneqsyslllqcyakggnvagiaaie
    nevygsgavfpswvilrtlvianfkcrrldgmetafqevkargynpdlvifnsmlsiyak
    ngmyskatevfdsikrsglspdlitynslmdmyakcsesweaekilnqlkcsqtmkpdvv
    syntvingfckqglvkeaqrvlsemvadgmapcavtyhtlvggysslemfsearevigym
    vqhglkpmeltyrrvvesycrakrfeeargflsevsetdldfdkkaleayiedaqfgr
    

    Sequence, based on observed residues (ATOM records):
    >4oe1A (A:)
    pdaqvlvlaisshplptlaaflasrrdellraditsllkalelsghwewalallrwagke
    gaadasalemvvralgregqhdavcalldetplppgsrldvrayttvlhalsragryera
    lelfaelrrqgvaptlvtynvvldvygrmgrswprivalldemraagvepdgftastvia
    acsrdglvdeavaffedlkarghapcvvtynallqvfgkagnytealrvlgemeqngcqp
    davtynelagteeaarcldtmaspnaftyntvmtaygnvgkvdealalfdqmkktgfvpn
    vntynlvlgmlgkksrftvmlemlgemsrsgctpnrvtwntmlavsgkrgmedyvtrvle
    gmrssgvelsrdtyntliaaygrcgsrtnafkmynemtsagftpcittynallnvlsrqg
    dwstaqsivskmrtkgfkpneqsyslllqcyakggnvagiaaienevygsgavfpswvil
    rtlvianfkcrrldgmetafqevkargynpdlvifnsmlsiyakngmyskatevfdsikr
    sglspdlitynslmdmyakcsesweaekilnqlkcsqtmkpdvvsyntvingfckqglvk
    eaqrvlsemvadgmapcavtyhtlvggysslemfsearevigymvqhglkpmeltyrrvv
    esycrafeeargflsevkaleayieda
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >4oe1B (B:)
    hsflspdaqvlvlaisshplptlaaflasrrdellraditsllkalelsghwewalallr
    wagkegaadasalemvvralgregqhdavcalldetplppgsrldvrayttvlhalsrag
    ryeralelfaelrrqgvaptlvtynvvldvygrmgrswprivalldemraagvepdgfta
    stviaacsrdglvdeavaffedlkarghapcvvtynallqvfgkagnytealrvlgemeq
    ngcqpdavtynelagtyaragffeeaarcldtmaskgllpnaftyntvmtaygnvgkvde
    alalfdqmkktgfvpnvntynlvlgmlgkksrftvmlemlgemsrsgctpnrvtwntmla
    vsgkrgmedyvtrvlegmrssgvelsrdtyntliaaygrcgsrtnafkmynemtsagftp
    cittynallnvlsrqgdwstaqsivskmrtkgfkpneqsyslllqcyakggnvagiaaie
    nevygsgavfpswvilrtlvianfkcrrldgmetafqevkargynpdlvifnsmlsiyak
    ngmyskatevfdsikrsglspdlitynslmdmyakcsesweaekilnqlkcsqtmkpdvv
    syntvingfckqglvkeaqrvlsemvadgmapcavtyhtlvggysslemfsearevigym
    vqhglkpmeltyrrvvesycrakrfeeargflsevsetdldfdkkaleayiedaqfgr
    

    Sequence, based on observed residues (ATOM records):
    >4oe1B (B:)
    lspdaqvlvlaisshplptlaaflasrrdellraditsllkalelsghwewalallrwag
    kegaadasalemvvralgregqhdavcalldetplppgsrldvrayttvlhalsragrye
    ralelfaelrrqgvaptlvtynvvldvygrmgrswprivalldemraagvepdgftastv
    iaacsrdglvdeavaffedlkarghapcvvtynallqvfgkaealrvlgemeqngpdavt
    ynelagtyaragffeeaarcldtmaftyntvmtaygnvgkvdealalfdqmkktgfvpnv
    ntynlvlgmlgkksrftvmlemlgemsrsgctpnrvtwntmlavsgkrgmedyvtrvleg
    mrssgvelsrdtyntliaaygrcgsrtnafkmynemtsagftpcittynallnvlsrqgd
    wstaqsivskmrtkgfkpneqsyslllqcyakggnvagiaaienevyvfpswvilrtlvi
    anfkcrrldgmetafqevkargynpdlvifnsmlsiyakngmyskatevfdsikrsglsp
    dlitynslmdmyakcsesweaekilnqlkcsqtmkpdvvsyntvingfckqglvkeaqrv
    lsemvadgmapcavtyhtlvggysslemfsearevigymvqhglkpmeltyrrvvesycr
    akrfeeargflkaleayiedaqf
    

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.