PDB entry 4odw

View 4odw on RCSB PDB site
Description: Unliganded Fab structure of lipid A-specific antibody A6
Class: immune system
Keywords: Carbohydrate binding, IMMUNE SYSTEM
Deposited on 2014-01-10, released 2015-06-24
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-11-22, with a file datestamp of 2017-11-17.
Experiment type: XRAY
Resolution: 2.72 Å
R-factor: N/A
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: A6 Fab (IgG2b) heavy chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 4ODW
  • Chain 'B':
    Compound: A6 Fab (IgG2b kappa) light chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 4ODW (0-End)
    Domains in SCOPe 2.07: d4odwb1, d4odwb2
  • Chain 'H':
    Compound: A6 Fab (IgG2b) heavy chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 4ODW
  • Chain 'L':
    Compound: A6 Fab (IgG2b kappa) light chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 4ODW (0-End)
    Domains in SCOPe 2.07: d4odwl1, d4odwl2
  • Heterogens: TRS, HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >4odwB (B:)
    divltqstsslsaslgdrvtitcrasqdirnylswyqqrpdgtvklliyytsklhsgvps
    rfsgsgsgtdysltitnleqediatyfcqqgktlplytfgggtkleikradaaptvsifp
    psseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstl
    tltkdeyerhnsytceathktstspivksfnrnec
    

    Sequence, based on observed residues (ATOM records): (download)
    >4odwB (B:)
    divltqstsslsaslgdrvtitcrasqdirnylswyqqrpdgtvklliyytsklhsgvps
    rfsgsgsgtdysltitnleqediatyfcqqgktlplytfgggtkleikradaaptvsifp
    psseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstl
    tltkdeyerhnsytceathktstspivksfnrne
    

  • Chain 'H':
    No sequence available.

  • Chain 'L':
    Sequence, based on SEQRES records: (download)
    >4odwL (L:)
    divltqstsslsaslgdrvtitcrasqdirnylswyqqrpdgtvklliyytsklhsgvps
    rfsgsgsgtdysltitnleqediatyfcqqgktlplytfgggtkleikradaaptvsifp
    psseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstl
    tltkdeyerhnsytceathktstspivksfnrnec
    

    Sequence, based on observed residues (ATOM records): (download)
    >4odwL (L:)
    divltqstsslsaslgdrvtitcrasqdirnylswyqqrpdgtvklliyytsklhsgvps
    rfsgsgsgtdysltitnleqediatyfcqqgktlplytfgggtkleikradaaptvsifp
    psseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstl
    tltkdeyerhnsytceathktstspivksfnrne