PDB entry 4odw
View 4odw on RCSB PDB site
Description: Unliganded Fab structure of lipid A-specific antibody A6
Class: immune system
Keywords: Carbohydrate binding, IMMUNE SYSTEM
Deposited on
2014-01-10, released
2015-06-24
The last revision prior to the SCOPe 2.08 freeze date was dated
2017-11-22, with a file datestamp of
2017-11-17.
Experiment type: XRAY
Resolution: 2.72 Å
R-factor: N/A
AEROSPACI score: 0.16
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: A6 Fab (IgG2b) heavy chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Chain 'B':
Compound: A6 Fab (IgG2b kappa) light chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4odwb1, d4odwb2 - Chain 'H':
Compound: A6 Fab (IgG2b) heavy chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Chain 'L':
Compound: A6 Fab (IgG2b kappa) light chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4odwl1, d4odwl2 - Heterogens: TRS, HOH
PDB Chain Sequences:
- Chain 'A':
No sequence available.
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4odwB (B:)
divltqstsslsaslgdrvtitcrasqdirnylswyqqrpdgtvklliyytsklhsgvps
rfsgsgsgtdysltitnleqediatyfcqqgktlplytfgggtkleikradaaptvsifp
psseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstl
tltkdeyerhnsytceathktstspivksfnrnec
Sequence, based on observed residues (ATOM records): (download)
>4odwB (B:)
divltqstsslsaslgdrvtitcrasqdirnylswyqqrpdgtvklliyytsklhsgvps
rfsgsgsgtdysltitnleqediatyfcqqgktlplytfgggtkleikradaaptvsifp
psseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstl
tltkdeyerhnsytceathktstspivksfnrne
- Chain 'H':
No sequence available.
- Chain 'L':
Sequence, based on SEQRES records: (download)
>4odwL (L:)
divltqstsslsaslgdrvtitcrasqdirnylswyqqrpdgtvklliyytsklhsgvps
rfsgsgsgtdysltitnleqediatyfcqqgktlplytfgggtkleikradaaptvsifp
psseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstl
tltkdeyerhnsytceathktstspivksfnrnec
Sequence, based on observed residues (ATOM records): (download)
>4odwL (L:)
divltqstsslsaslgdrvtitcrasqdirnylswyqqrpdgtvklliyytsklhsgvps
rfsgsgsgtdysltitnleqediatyfcqqgktlplytfgggtkleikradaaptvsifp
psseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstl
tltkdeyerhnsytceathktstspivksfnrne