PDB entry 4o9u

View 4o9u on RCSB PDB site
Description: Mechanism of transhydrogenase coupling proton translocation and hydride transfer
Deposited on 2014-01-02, released 2015-01-28
The last revision was dated 2015-01-28, with a file datestamp of 2015-01-23.
Experiment type: XRAY
Resolution: 6.93 Å
R-factor: 0.216
AEROSPACI score: -0.03 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: NAD(P) transhydrogenase subunit alpha 2
    Species: Thermus thermophilus [TaxId:262724]
    Gene: TT_C1779
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: NAD(P) transhydrogenase subunit beta
    Species: Thermus thermophilus [TaxId:262724]
    Gene: TT_C1778
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: NAD(P) transhydrogenase subunit alpha 2
    Species: Thermus thermophilus [TaxId:262724]
    Gene: TT_C1779
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: NAD(P) transhydrogenase subunit beta
    Species: Thermus thermophilus [TaxId:262724]
    Gene: TT_C1778
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: NAD/NADP transhydrogenase alpha subunit 1
    Species: Thermus thermophilus [TaxId:262724]
    Gene: TT_C1780
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: NAD/NADP transhydrogenase alpha subunit 1
    Species: Thermus thermophilus [TaxId:262724]
    Gene: TT_C1780
    Database cross-references and differences (RAF-indexed):
  • Heterogens: NAP, NAD

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4o9uA (A:)
mefgfwsalyifvltaflgyelitrvpvilhtplmsgsnfihgvvvvgamvvlghaetgl
ekligflgvilgaanaaggyavtvrmlemferkpgqgggr

    Sequence, based on observed residues (ATOM records):
    >4o9uA (A:)
mefgfwsalyifvltaflgyelitrvpvilhtplmsgsnfihgvvvvgamvvlghaetgl
ekligflgvilgaanaaggyavtvrmlemferkp

  • Chain 'B':
    Sequence, based on SEQRES records:
    >4o9uB (B:)
mdliqaayfvvailfivglkrmahpttaksgivwagwgmvlavlatffwpgmgnfalill
alllgsvvawwaavrvamtdmpqmvaiyngmgggaaatiaavellkgafentglmalail
ggligsvaftgsliafaklqgimksrpilfpgqkavnalvlaltvviglsllwndatasi
vlffllallfgvlmtlpigggdmpvaisfynaftgmavgfegfavgnpalmvagtlvgaa
gtlltvlmaramnrsvwsvlvggfgveqeagevkgslkpidvedaavmlayagkvvfvpg
ygmalsqaqhklkeladlleargvevkfaihpvagrmpghmnvllaeagvdydklkdlee
inpefptvdvavvigandvvnpaarrpgsplygmpildvdkaknvivikrgqgkgfagve
nelfyaentrmlygdaqkvlteliqalkrl

    Sequence, based on observed residues (ATOM records):
    >4o9uB (B:)
mdliqaayfvvailfivglkrmahpttaksgivwagwgmvlavlatffwpgmgnfalill
alllgsvvawwaavrvamtdmpqmvaiyngmgggaaatiaavellkgafentglmalail
ggligsvaftgsliafaklqgimksrpilfpgqkavnalvlaltvviglsllwndatasi
vlffllallfgvlmtlpigggdmpvaisfynaftgmavgfegfavgnpalmvagtlvgaa
gtlltvlmaramnrsvwsvlvggkgslkpidvedaavmlayagkvvfvpgygmalsqaqh
klkeladlleargvevkfaihpvagrmpghmnvllaeagvdydklkdleeinpefptvdv
avvigandvvnpaarrpgsplygmpildvdkaknvivikrgqgkgfagvenelfyaentr
mlygdaqkvlteliqalkrl

  • Chain 'C':
    Sequence, based on SEQRES records:
    >4o9uC (C:)
mefgfwsalyifvltaflgyelitrvpvilhtplmsgsnfihgvvvvgamvvlghaetgl
ekligflgvilgaanaaggyavtvrmlemferkpgqgggr

    Sequence, based on observed residues (ATOM records):
    >4o9uC (C:)
mefgfwsalyifvltaflgyelitrvpvilhtplmsgsnfihgvvvvgamvvlghaetgl
ekligflgvilgaanaaggyavtvrmlemf

  • Chain 'D':
    Sequence, based on SEQRES records:
    >4o9uD (D:)
mdliqaayfvvailfivglkrmahpttaksgivwagwgmvlavlatffwpgmgnfalill
alllgsvvawwaavrvamtdmpqmvaiyngmgggaaatiaavellkgafentglmalail
ggligsvaftgsliafaklqgimksrpilfpgqkavnalvlaltvviglsllwndatasi
vlffllallfgvlmtlpigggdmpvaisfynaftgmavgfegfavgnpalmvagtlvgaa
gtlltvlmaramnrsvwsvlvggfgveqeagevkgslkpidvedaavmlayagkvvfvpg
ygmalsqaqhklkeladlleargvevkfaihpvagrmpghmnvllaeagvdydklkdlee
inpefptvdvavvigandvvnpaarrpgsplygmpildvdkaknvivikrgqgkgfagve
nelfyaentrmlygdaqkvlteliqalkrl

    Sequence, based on observed residues (ATOM records):
    >4o9uD (D:)
mdliqaayfvvailfivglkrmahpttaksgivwagwgmvlavlatffwpgmgnfalill
alllgsvvawwaavrvamtdmpqmvaiyngmgggaaatiaavellkgafentglmalail
ggligsvaftgsliafaklqgimksrpilfpgqkavnalvlaltvviglsllwndatasi
vlffllallfgvlmtlpigggdmpvaisfynaftgmavgfegfavgnpalmvagtlvgaa
gtlltvlmaramnrsvwsvlkgslkpidvedaavmlayagkvvfvpgygmalsqaqhklk
eladlleargvevkfaihpvagrmpghmnvllaeagvdydklkdleeinpefptvdvavv
igandvvnpaarrpgsplygmpildvdkaknvivikrgqgkgfagvenelfyaentrmly
gdaqkvlteliqalkrl

  • Chain 'E':
    Sequence, based on SEQRES records:
    >4o9uE (E:)
mhhhhhhhhmvtvavpkerapgerrvalvpevvarlvkggarvrvergagegayhpdeay
qeagaevvergellkgahllftvqpppedliqalepgaivvgfvqphknlelvralqakk
atviamelipritraqsmdalssqatvagylaaihaarlsprffpmlttaagtirpakvm
vmgvgvaglmaiatakrlgaqvfaydvrkaaleqalslgakpielpisaegeggyarelt
eeekriqhealrdhvagmdvlittaqvpgrrapilltedmverlkpgtvvvdlaaesggn
cvltkpgevvevrgvrvygplnlpselsvhasemyaknlynlsslliekgafapkwedei
vraallmkegevlhgptkallgga

    Sequence, based on observed residues (ATOM records):
    >4o9uE (E:)
mvtvavpkerapgerrvalvpevvarlvkggarvrvergagegayhpdeayqeagaevve
rgellkgahllftvqpppedliqalepgaivvgfvqphknlelvralqakkatviameli
pritraqsmdalssqatvagylaaihaarlsprffpmlttaagtirpakvmvmgvgvagl
maiatakrlgaqvfaydvrkaaleqalslgakpielpisaegeggyarelteeekriqhe
alrdhvagmdvlittaqvpgrrapilltedmverlkpgtvvvdlaaesggncvltkpgev
vevrgvrvygplnlpselsvhasemyaknlynlsslliekgafapkwedeivraallmke
gevlhgptkall

  • Chain 'F':
    Sequence, based on SEQRES records:
    >4o9uF (F:)
mhhhhhhhhmvtvavpkerapgerrvalvpevvarlvkggarvrvergagegayhpdeay
qeagaevvergellkgahllftvqpppedliqalepgaivvgfvqphknlelvralqakk
atviamelipritraqsmdalssqatvagylaaihaarlsprffpmlttaagtirpakvm
vmgvgvaglmaiatakrlgaqvfaydvrkaaleqalslgakpielpisaegeggyarelt
eeekriqhealrdhvagmdvlittaqvpgrrapilltedmverlkpgtvvvdlaaesggn
cvltkpgevvevrgvrvygplnlpselsvhasemyaknlynlsslliekgafapkwedei
vraallmkegevlhgptkallgga

    Sequence, based on observed residues (ATOM records):
    >4o9uF (F:)
mvtvavpkerapgerrvalvpevvarlvkggarvrvergagegayhpdeayqeagaevve
rgellkgahllftvqpppedliqalepgaivvgfvqphknlelvralqakkatviameli
pritraqsmdalssqatvagylaaihaarlsprffpmlttaagtirpakvmvmgvgvagl
maiatakrlgaqvfaydvrkaaleqalslgakpielpisaegarelteeekriqhealrd
hvagmdvlittaqvpgrrapilltedmverlkpgtvvvdlaaesggncvltkpgevvevr
gvrvygplnlpselsvhasemyaknlynlsslliekgafapkwedeivraallmkegevl
hgptkallg