PDB entry 4o5c

View 4o5c on RCSB PDB site
Description: structure of human dna polymerase complexed with n7-mg as the template base in a 1-nucleotide gapped dna
Deposited on 2013-12-19, released 2014-07-02
The last revision was dated 2015-05-27, with a file datestamp of 2015-05-22.
Experiment type: XRAY
Resolution: 2.36 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA polymerase beta
    Species: Homo sapiens [TaxId:9606]
    Gene: POLB
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: DNA (5'-d(p*gp*tp*cp*gp*g)-3')
    Species: synthetic construct, synthetic [TaxId:32630]
  • Chain 'P':
    Compound: DNA (5'-d(*gp*cp*tp*gp*ap*tp*gp*cp*gp*a)-3')
    Species: synthetic construct, synthetic [TaxId:32630]
  • Chain 'T':
    Compound: DNA (5'-d(*cp*cp*gp*ap*cp*(fmg)p*tp*cp*gp*cp*ap*tp*cp*ap*gp*c)-3')
    Species: synthetic construct, synthetic [TaxId:32630]
  • Heterogens: NA, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4o5cA (A:)
pqetlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvg
tkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlr
knedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgae
ssgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpsknd
ekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgv
ageplpvdsekdifdyiqwkyrepkdrse

    Sequence, based on observed residues (ATOM records):
    >4o5cA (A:)
pqetlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvg
tkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlr
knedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgae
ssgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndek
eyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvag
eplpvdsekdifdyiqwkyrepkdrse

  • Chain 'D':
    No sequence available.

  • Chain 'P':
    No sequence available.

  • Chain 'T':
    No sequence available.