PDB entry 4nub

View 4nub on RCSB PDB site
Description: crystal structure of escherichia coli ribosomal oxygenase ycfd
Deposited on 2013-12-03, released 2014-02-26
The last revision was dated 2017-11-22, with a file datestamp of 2017-11-17.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: N/A
AEROSPACI score: 0.17 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 50S ribosomal protein L16 arginine hydroxylase
    Species: Escherichia coli [TaxId:83333]
    Gene: b1128, JW1114, ycfD
    Database cross-references and differences (RAF-indexed):
    • Uniprot P27431 (0-End)
      • engineered mutation (145-146)
  • Heterogens: FE, GOL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4nubA (A:)
meyqltlnwpdflerhwqkrpvvlkrgfnnfidpispdelaglamesevdsrlvshqdgk
wqvshgpfesydhlgetnwsllvqavnhwheptaalmrpfrelpdwriddlmisfsvpgg
gvgphldqydvfiiqgtgrrrwrvgaalqmkqhcphpdllqvdpfeaiideelepgdily
ippgfphegyalenamnysvgfrapntrelisgfadyvlqrelggnyysdpdvpprahpa
dvlpqemdklremmlelinqpehfkqwfgefisqsrheldiappeppyqpdeiydalkqg
evlvrlgglrvlrigddvyangekidsphrpaldalasnialtaenfgdaledpsflaml
aalvnsgywffegsgrvehhhhhh

    Sequence, based on observed residues (ATOM records):
    >4nubA (A:)
meyqltlnwpdflerhwqkrpvvlkrgfnnfidpispdelaglamesevdsrlvshqdgk
wqvshgpfesydhlgetnwsllvqavnhwheptaalmrpfrelpdwriddlmisfsvpgg
gvgphldqydvfiiqgtgrrrwrvgaallqvdpfeaiideelepgdilyippgfphegya
lenamnysvgfrapntrelisgfadyvlqrelggnyysdpdvpprahpadvlpqemdklr
emmlelinqpehfkqwfgefisqsrheldiappeppyqpdeiydalkqgevlvrlgglrv
lrigddvyangekidsphrpaldalasnialtaenfgdaledpsflamlaalvnsgywff
e