PDB entry 4nu5

View 4nu5 on RCSB PDB site
Description: crystal structure of ptdh r301a
Deposited on 2013-12-03, released 2014-03-12
The last revision was dated 2017-11-22, with a file datestamp of 2017-11-17.
Experiment type: XRAY
Resolution: 2.35 Å
R-factor: N/A
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Phosphonate dehydrogenase
    Species: Pseudomonas stutzeri [TaxId:316]
    Gene: ptxD
    Database cross-references and differences (RAF-indexed):
    • Uniprot O69054 (Start-328)
      • conflict (12)
      • conflict (25)
      • conflict (70)
      • conflict (129)
      • conflict (131)
      • conflict (136)
      • conflict (149)
      • conflict (174)
      • conflict (214)
      • conflict (274-275)
      • engineered mutation (300)
      • conflict (312)
      • conflict (314)
      • conflict (318)
      • conflict (324)
  • Chain 'B':
    Compound: Phosphonate dehydrogenase
    Species: Pseudomonas stutzeri [TaxId:316]
    Gene: ptxD
    Database cross-references and differences (RAF-indexed):
    • Uniprot O69054
      • conflict (12)
      • conflict (25)
      • conflict (70)
      • conflict (129)
      • conflict (131)
      • conflict (136)
      • conflict (149)
      • conflict (174)
      • conflict (214)
      • conflict (274-275)
      • engineered mutation (300)
      • conflict (312)
      • conflict (314)
      • conflict (318)
      • conflict (324)
  • Heterogens: NAD, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4nu5A (A:)
mlpklvithrvheeilqllaphcelitnqtdstltreeilrrcrdaqammafmpdrvdad
flqacpelrvigcalkgfdnfdvdactargvwltfvpdlltvptaelaiglavglgrhlr
aadafvrsgkfrgwqprfygtgldnatvgflgmgaiglamadrlqgwgatlqyhaakald
tqteqrlglrqvacselfassdfillalplnadtlhlvnaellalvrpgallvnpcrgsv
vdeaavlaalergqlggyaadvfemedwaradrpqqidpallahpntlftphigsavrav
aleiercaaqnilqalagerpinavnrlp

    Sequence, based on observed residues (ATOM records):
    >4nu5A (A:)
lpklvithrvheeilqllaphcelitnqtdstltreeilrrcrdaqammafmpdrvdadf
lqacpelrvigcalkgfdnfdvdactargvwltfvpdlltvptaelaiglavglgrhlra
adafvrsgkfrgwqprfygtgldnatvgflgmgaiglamadrlqgwgatlqyhaakaldt
qteqrlglrqvacselfassdfillalplnadtlhlvnaellalvrpgallvnpcrgsvv
deaavlaalergqlggyaadvfemedwaradrpqqidpallahpntlftphigsavrava
leiercaaqnilqalagerpinavnrlp

  • Chain 'B':
    Sequence, based on SEQRES records:
    >4nu5B (B:)
mlpklvithrvheeilqllaphcelitnqtdstltreeilrrcrdaqammafmpdrvdad
flqacpelrvigcalkgfdnfdvdactargvwltfvpdlltvptaelaiglavglgrhlr
aadafvrsgkfrgwqprfygtgldnatvgflgmgaiglamadrlqgwgatlqyhaakald
tqteqrlglrqvacselfassdfillalplnadtlhlvnaellalvrpgallvnpcrgsv
vdeaavlaalergqlggyaadvfemedwaradrpqqidpallahpntlftphigsavrav
aleiercaaqnilqalagerpinavnrlp

    Sequence, based on observed residues (ATOM records):
    >4nu5B (B:)
klvithrvheeilqllaphcelitnqtdstltreeilrrcrdaqammafmpdrvdadflq
acpelrvigcalkgfdnfdvdactargvwltfvpdlltvptaelaiglavglgrhlraad
afvrsgkfrgwqprfygtgldnatvgflgmgaiglamadrlqgwgatlqyhaakaldtqt
eqrlglrqvacselfassdfillalplnadtlhlvnaellalvrpgallvnpcrgsvvde
aavlaalergqlggyaadvfemedwaradrpqqidpallahpntlftphigsavravale
iercaaqnilqalagerpinavnr