PDB entry 4nnp

View 4nnp on RCSB PDB site
Description: Crystal Structure of Apo Manganese ABC transporter MntC from Staphylococcus aureus bound to an antagonistic fab fragment
Class: transport protein/immune system
Keywords: ABC superfamily ATP binding cassette transporter, MntC, fab, Apo, MRSA, TRANSPORT PROTEIN-IMMUNE SYSTEM complex
Deposited on 2013-11-18, released 2014-12-10
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-05-20, with a file datestamp of 2020-05-15.
Experiment type: XRAY
Resolution: 2.69 Å
R-factor: N/A
AEROSPACI score: 0.17 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Lipoprotein
    Species: Staphylococcus aureus subsp. aureus [TaxId:158878]
    Gene: SAV0631
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4nnpa_
  • Chain 'B':
    Compound: Lipoprotein
    Species: Staphylococcus aureus subsp. aureus [TaxId:158878]
    Gene: SAV0631
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4nnpb_
  • Chain 'H':
    Compound: Heavy chain of antagonistic fab fragment
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 4NNP
    Domains in SCOPe 2.08: d4nnph_
  • Chain 'L':
    Compound: Light chain of antagonistic fab fragment
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 4NNP
    Domains in SCOPe 2.08: d4nnpl1, d4nnpl2
  • Chain 'X':
    Compound: Heavy chain of antagonistic fab fragment
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 4NNP
    Domains in SCOPe 2.08: d4nnpx_
  • Chain 'Y':
    Compound: Light chain of antagonistic fab fragment
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 4NNP
    Domains in SCOPe 2.08: d4nnpy1, d4nnpy2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4nnpA (A:)
gtggkqssdksngklkvvttnsilydmaknvggdnvdihsivpvgqdpheyevkpkdikk
ltdadvilynglnletgngwfekaleqagkslkdkkviavskdvkpiylngeegnkdkqd
phawlsldngikyvktiqqtfidndkkhkadyekqgnkyiaqleklnndskdkfndipke
qramitsegafkyfskqygitpgyiweintekqgtpeqmrqaiefvkkhklkhllvetsv
dkkameslseetkkdifgevytdsigkegtkgdsyykmmksnietvhgsmk

    Sequence, based on observed residues (ATOM records): (download) 
    >4nnpA (A:)
klkvvttnsilydmaknvggdnvdihsivpvgqdpheyevkpkdikkltdadvilyngln
letgngwfekaleqagkslkdkkviavskdvkpiylneegnkdkqdphawlsldngikyv
ktiqqtfidndkkhkadyekqgnkyiaqleklnndskdkfndipkeqramitsegafkyf
skqygitpgyiweintekqgtpeqmrqaiefvkkhklkhllvetsvdkkameslseeifg
evytdsigkegtkgdsyykmmksnietvhgsmk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4nnpB (B:)
gtggkqssdksngklkvvttnsilydmaknvggdnvdihsivpvgqdpheyevkpkdikk
ltdadvilynglnletgngwfekaleqagkslkdkkviavskdvkpiylngeegnkdkqd
phawlsldngikyvktiqqtfidndkkhkadyekqgnkyiaqleklnndskdkfndipke
qramitsegafkyfskqygitpgyiweintekqgtpeqmrqaiefvkkhklkhllvetsv
dkkameslseetkkdifgevytdsigkegtkgdsyykmmksnietvhgsmk

    Sequence, based on observed residues (ATOM records): (download) 
    >4nnpB (B:)
klkvvttnsilydmaknvggdnvdihsivpvgqdpheyevkpkdikkltdadvilyngln
letgngwfekaleqagkslkdkkviavskdvkpiylngeegnkdkqdphawlsldngiky
vktiqqtfidndkkhkadyekqgnkyiaqleklnndskdkfndipkeqramitsegafky
fskqygitpgyiweintekqgtpeqmrqaiefvkkhklkhllvetsvdkkameslseetf
gevytdsigkegtkgdsyykmmksnietvhgsmk

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >4nnpH (H:)
eisevqlvesggglvqpggslrlscaasgfnfssssihwvrqapgkglewvasiysysgy
tyyadsvkgrftisadtskntaylqmnslraedtavyycarqssaeieswyyysgeamdy
wgqgtlvtvssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsg
vhtfpavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscdkth

    Sequence, based on observed residues (ATOM records): (download) 
    >4nnpH (H:)
qlvesggglvqpggslrlscaasgfnfssssihwvrqapgkglewvasiysysgytyyad
svkgrftisadtskntaylqmnslraedtavyycarqssaeieswyyysgeamdywgqgt
lvtvssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfp
avlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepk

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >4nnpL (L:)
sdiqmtqspsslsasvgdrvtitcrasqsvssavawyqqkpgkapklliysasslysgvp
srfsgsrsgtdftltisslqpedfatyycqqsyysspftfgqgtkveikrtvaapsvfif
ppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsst
ltlskadyekhkvyacevthqglsspvtksfnrgec

    Sequence, based on observed residues (ATOM records): (download) 
    >4nnpL (L:)
diqmtqspsslsasvgdrvtitcrasqsvssavawyqqkpgkapklliysasslysgvps
rfsgsrsgtdftltisslqpedfatyycqqsyysspftfgqgtkveikrtvaapsvfifp
psdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstl
tlskadyekhkvyacevthqglsspvtksfnrg

  • Chain 'X':
    Sequence, based on SEQRES records: (download) 
    >4nnpX (X:)
eisevqlvesggglvqpggslrlscaasgfnfssssihwvrqapgkglewvasiysysgy
tyyadsvkgrftisadtskntaylqmnslraedtavyycarqssaeieswyyysgeamdy
wgqgtlvtvssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsg
vhtfpavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscdkth

    Sequence, based on observed residues (ATOM records): (download) 
    >4nnpX (X:)
qlvesggglvqpggslrlscaasgfnfssssihwvrqapgkglewvasiysysgytyyad
svkgrftisadtskntaylqmnslraedtavyycarqssaeieswyyysgeamdywgqgt
lvtvssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfp
avlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepk

  • Chain 'Y':
    Sequence, based on SEQRES records: (download) 
    >4nnpY (Y:)
sdiqmtqspsslsasvgdrvtitcrasqsvssavawyqqkpgkapklliysasslysgvp
srfsgsrsgtdftltisslqpedfatyycqqsyysspftfgqgtkveikrtvaapsvfif
ppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsst
ltlskadyekhkvyacevthqglsspvtksfnrgec

    Sequence, based on observed residues (ATOM records): (download) 
    >4nnpY (Y:)
diqmtqspsslsasvgdrvtitcrasqsvssavawyqqkpgkapklliysasslysgvps
rfsgsrsgtdftltisslqpedfatyycqqsyysspftfgqgtkveikrtvaapsvfifp
psdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstl
tlskadyekhkvyacevthqglsspvtksfnrg