PDB entry 4nn0
View 4nn0 on RCSB PDB site
Description: Crystal structure of the C1QTNF5 globular domain in space group P63
Class: cell adhesion
Keywords: L-ORMD, late onset retinal macular degeneration, S163R, 10-strand jelly-roll fold, Cellular adhesion, CELL ADHESION
Deposited on
2013-11-15, released
2014-03-26
The last revision prior to the SCOPe 2.08 freeze date was dated
2014-04-23, with a file datestamp of
2014-04-18.
Experiment type: XRAY
Resolution: 1.42 Å
R-factor: 0.106
AEROSPACI score: 0.66
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Complement C1q tumor necrosis factor-related protein 5
Species: Homo sapiens [TaxId:9606]
Gene: C1QTNF5, CTRP5, UNQ303/PRO344
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4nn0a1, d4nn0a2 - Chain 'B':
Compound: Complement C1q tumor necrosis factor-related protein 5
Species: Homo sapiens [TaxId:9606]
Gene: C1QTNF5, CTRP5, UNQ303/PRO344
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4nn0b1, d4nn0b2 - Chain 'C':
Compound: Complement C1q tumor necrosis factor-related protein 5
Species: Homo sapiens [TaxId:9606]
Gene: C1QTNF5, CTRP5, UNQ303/PRO344
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4nn0c1, d4nn0c2 - Heterogens: EDO, SO4, ACT, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4nn0A (A:)
arsafsakrsesrvpppsdaplpfdrvlvneqghydavtgkftcqvpgvyyfavhatvyr
aslqfdlvkngesiasffqffggwpkpaslsggamvrlepedqvwvqvgvgdyigiyasi
ktdstfsgflvysdwhsspvfahhhhhh
Sequence, based on observed residues (ATOM records): (download)
>4nn0A (A:)
arsafsakrsesrvpppsdaplpfdrvlvneqghydavtgkftcqvpgvyyfavhatvyr
aslqfdlvkngesiasffqffggwpkpaslsggamvrlepedqvwvqvgvgdyigiyasi
ktdstfsgflvysdwhs
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4nn0B (B:)
arsafsakrsesrvpppsdaplpfdrvlvneqghydavtgkftcqvpgvyyfavhatvyr
aslqfdlvkngesiasffqffggwpkpaslsggamvrlepedqvwvqvgvgdyigiyasi
ktdstfsgflvysdwhsspvfahhhhhh
Sequence, based on observed residues (ATOM records): (download)
>4nn0B (B:)
arsafsakrsesrvpppsdaplpfdrvlvneqghydavtgkftcqvpgvyyfavhatvyr
aslqfdlvkngesiasffqffggwpkpaslsggamvrlepedqvwvqvgvgdyigiyasi
ktdstfsgflvysdwhsspvf
- Chain 'C':
Sequence, based on SEQRES records: (download)
>4nn0C (C:)
arsafsakrsesrvpppsdaplpfdrvlvneqghydavtgkftcqvpgvyyfavhatvyr
aslqfdlvkngesiasffqffggwpkpaslsggamvrlepedqvwvqvgvgdyigiyasi
ktdstfsgflvysdwhsspvfahhhhhh
Sequence, based on observed residues (ATOM records): (download)
>4nn0C (C:)
arsafsakrsesrvpppsdaplpfdrvlvneqghydavtgkftcqvpgvyyfavhatvyr
aslqfdlvkngesiasffqffggwpkpaslsggamvrlepedqvwvqvgvgdyigiyasi
ktdstfsgflvysdwhss