PDB entry 4nm6

View 4nm6 on RCSB PDB site
Description: crystal structure of tet2-dna complex
Deposited on 2013-11-14, released 2013-12-18
The last revision was dated 2017-07-26, with a file datestamp of 2017-07-21.
Experiment type: XRAY
Resolution: 2.03 Å
R-factor: N/A
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Methylcytosine dioxygenase TET2
    Species: Homo sapiens [TaxId:9606]
    Gene: TET2, KIAA1546, Nbla00191
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: 5'-d(*ap*cp*cp*ap*cp*(5cm)p*gp*gp*tp*gp*gp*t)-3'
  • Chain 'C':
    Compound: 5'-d(*ap*cp*cp*ap*cp*(5cm)p*gp*gp*tp*gp*gp*t)-3'
  • Heterogens: ZN, FE2, OGA, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4nm6A (A:)
ggsdfpscrcveqiiekdegpfythlgagpnvaaireimeerfgqkgkairierviytgk
egkssqgcpiakwvvrrssseekllclvreraghtceaavivililvwegiplsladkly
seltetlrkygtltnrrcalneertcacqgldpetcgasfsfgcswsmyyngckfarski
prkfkllgddpkeeekleshlqnlstlmaptykklapdaynnqieyehrapecrlglkeg
rpfsgvtacldfcahahrdlhnmqngstlvctltrednrefggkpedeqlhvlplykvsd
vdefgsveaqeekkrsgaiqvlssfrrkvrmlaepvktcrqrkleakkaaaeklsggggs
ggggsggggsdevwsdseqsfldpdiggvavapthgsiliecakrelhattplknpnrnh
ptrislvfyqhksmnepkhglalweakmaekarekeeecekyg

    Sequence, based on observed residues (ATOM records):
    >4nm6A (A:)
scrcegpfythlgagpnvaaireimeerfgqkgkairierviytgkegkssqgcpiakwv
vrrssseekllclvreraghtceaavivililvwegiplsladklyseltetlrkygtlt
nrrcalneertcacqgldpetcgasfsfgcswsmyyngckfarskiprkfkllgddpkee
ekleshlqnlstlmaptykklapdaynnqieyehrapecrlglkegrpfsgvtacldfca
hahrdlhnmqngstlvctltrednrefggkpedeqlhvlplykvsdvdefgsveaqeekk
rsgaiqvlssfrrkvrmlaepvktgsdevwsdseqsfldpdiggvavapthgsiliecak
relhattplknpnrnhptrislvfyqhksmnepkhglalweakmaek

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.