PDB entry 4nj6

View 4nj6 on RCSB PDB site
Description: PB1 Domain of AtARF7
Deposited on 2013-11-08, released 2014-03-26
The last revision was dated 2014-05-14, with a file datestamp of 2014-05-09.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.211
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Auxin response factor 7
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: ARF7, BIP, IAA21, IAA23, IAA25, NPH4, TIR5, At5g20730, T1M15.130
    Database cross-references and differences (RAF-indexed):
    • Uniprot P93022
      • engineered mutation (9)
      • engineered mutation (59)
      • engineered mutation (63)
  • Chain 'B':
    Compound: Auxin response factor 7
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: ARF7, BIP, IAA21, IAA23, IAA25, NPH4, TIR5, At5g20730, T1M15.130
    Database cross-references and differences (RAF-indexed):
    • Uniprot P93022
      • engineered mutation (9)
      • engineered mutation (59)
      • engineered mutation (63)
  • Chain 'C':
    Compound: Auxin response factor 7
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: ARF7, BIP, IAA21, IAA23, IAA25, NPH4, TIR5, At5g20730, T1M15.130
    Database cross-references and differences (RAF-indexed):
    • Uniprot P93022
      • engineered mutation (9)
      • engineered mutation (59)
      • engineered mutation (63)
  • Chain 'D':
    Compound: Auxin response factor 7
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: ARF7, BIP, IAA21, IAA23, IAA25, NPH4, TIR5, At5g20730, T1M15.130
    Database cross-references and differences (RAF-indexed):
    • Uniprot P93022
      • engineered mutation (9)
      • engineered mutation (59)
      • engineered mutation (63)
  • Chain 'E':
    Compound: Auxin response factor 7
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: ARF7, BIP, IAA21, IAA23, IAA25, NPH4, TIR5, At5g20730, T1M15.130
    Database cross-references and differences (RAF-indexed):
    • Uniprot P93022
      • engineered mutation (9)
      • engineered mutation (59)
      • engineered mutation (63)
  • Chain 'F':
    Compound: Auxin response factor 7
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: ARF7, BIP, IAA21, IAA23, IAA25, NPH4, TIR5, At5g20730, T1M15.130
    Database cross-references and differences (RAF-indexed):
    • Uniprot P93022 (Start-94)
      • engineered mutation (9)
      • engineered mutation (59)
      • engineered mutation (63)
  • Chain 'G':
    Compound: Auxin response factor 7
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: ARF7, BIP, IAA21, IAA23, IAA25, NPH4, TIR5, At5g20730, T1M15.130
    Database cross-references and differences (RAF-indexed):
    • Uniprot P93022
      • engineered mutation (9)
      • engineered mutation (59)
      • engineered mutation (63)
  • Chain 'H':
    Compound: Auxin response factor 7
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: ARF7, BIP, IAA21, IAA23, IAA25, NPH4, TIR5, At5g20730, T1M15.130
    Database cross-references and differences (RAF-indexed):
    • Uniprot P93022
      • engineered mutation (9)
      • engineered mutation (59)
      • engineered mutation (63)
  • Chain 'I':
    Compound: Auxin response factor 7
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: ARF7, BIP, IAA21, IAA23, IAA25, NPH4, TIR5, At5g20730, T1M15.130
    Database cross-references and differences (RAF-indexed):
    • Uniprot P93022
      • engineered mutation (9)
      • engineered mutation (63)
  • Chain 'J':
    Compound: Auxin response factor 7
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: ARF7, BIP, IAA21, IAA23, IAA25, NPH4, TIR5, At5g20730, T1M15.130
    Database cross-references and differences (RAF-indexed):
    • Uniprot P93022
      • engineered mutation (9)
      • engineered mutation (59)
      • engineered mutation (63)
  • Chain 'K':
    Compound: Auxin response factor 7
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: ARF7, BIP, IAA21, IAA23, IAA25, NPH4, TIR5, At5g20730, T1M15.130
    Database cross-references and differences (RAF-indexed):
    • Uniprot P93022
      • engineered mutation (9)
      • engineered mutation (59)
      • engineered mutation (63)
  • Chain 'L':
    Compound: Auxin response factor 7
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: ARF7, BIP, IAA21, IAA23, IAA25, NPH4, TIR5, At5g20730, T1M15.130
    Database cross-references and differences (RAF-indexed):
    • Uniprot P93022
      • engineered mutation (9)
      • engineered mutation (59)
      • engineered mutation (63)
  • Chain 'M':
    Compound: Auxin response factor 7
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: ARF7, BIP, IAA21, IAA23, IAA25, NPH4, TIR5, At5g20730, T1M15.130
    Database cross-references and differences (RAF-indexed):
    • Uniprot P93022
      • engineered mutation (9)
      • engineered mutation (59)
      • engineered mutation (63)
  • Chain 'N':
    Compound: Auxin response factor 7
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: ARF7, BIP, IAA21, IAA23, IAA25, NPH4, TIR5, At5g20730, T1M15.130
    Database cross-references and differences (RAF-indexed):
    • Uniprot P93022
      • engineered mutation (9)
      • engineered mutation (59)
      • engineered mutation (63)
  • Chain 'O':
    Compound: Auxin response factor 7
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: ARF7, BIP, IAA21, IAA23, IAA25, NPH4, TIR5, At5g20730, T1M15.130
    Database cross-references and differences (RAF-indexed):
    • Uniprot P93022
      • engineered mutation (9)
      • engineered mutation (59)
      • engineered mutation (63)
  • Chain 'P':
    Compound: Auxin response factor 7
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: ARF7, BIP, IAA21, IAA23, IAA25, NPH4, TIR5, At5g20730, T1M15.130
    Database cross-references and differences (RAF-indexed):
    • Uniprot P93022
      • engineered mutation (9)
      • engineered mutation (59)
      • engineered mutation (63)
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4nj6A (A:)
gshmmrtytavqkrgsvgrsidvnryrgydelrhdlarmfgiegqledpqtsdwklvyva
henaillvgddpweefvncvqsikilssaevqqms

    Sequence, based on observed residues (ATOM records):
    >4nj6A (A:)
tytavqkrgsvgrsidvnryrgydelrhdlarmfgiegqledpqtsdwklvyvahenail
lvgddpweefvncvqsikilssaevqqm

  • Chain 'B':
    Sequence, based on SEQRES records:
    >4nj6B (B:)
gshmmrtytavqkrgsvgrsidvnryrgydelrhdlarmfgiegqledpqtsdwklvyva
henaillvgddpweefvncvqsikilssaevqqms

    Sequence, based on observed residues (ATOM records):
    >4nj6B (B:)
rtytavqkrgsvgrsidvnryrgydelrhdlarmfgiegqledpqtsdwklvyvahenai
llvgddpweefvncvqsikilssaevqqm

  • Chain 'C':
    Sequence, based on SEQRES records:
    >4nj6C (C:)
gshmmrtytavqkrgsvgrsidvnryrgydelrhdlarmfgiegqledpqtsdwklvyva
henaillvgddpweefvncvqsikilssaevqqms

    Sequence, based on observed residues (ATOM records):
    >4nj6C (C:)
rtytavqkrgsvgrsidvnryrgydelrhdlarmfgiegqledpqtsdwklvyvahenai
llvgddpweefvncvqsikilssaevqqm

  • Chain 'D':
    Sequence, based on SEQRES records:
    >4nj6D (D:)
gshmmrtytavqkrgsvgrsidvnryrgydelrhdlarmfgiegqledpqtsdwklvyva
henaillvgddpweefvncvqsikilssaevqqms

    Sequence, based on observed residues (ATOM records):
    >4nj6D (D:)
tytavqkrgsvgrsidvnryrgydelrhdlarmfgiegqledpqtsdwklvyvahenail
lvgddpweefvncvqsikilssaevqqm

  • Chain 'E':
    Sequence, based on SEQRES records:
    >4nj6E (E:)
gshmmrtytavqkrgsvgrsidvnryrgydelrhdlarmfgiegqledpqtsdwklvyva
henaillvgddpweefvncvqsikilssaevqqms

    Sequence, based on observed residues (ATOM records):
    >4nj6E (E:)
ytavqkrgsvgrsidvnryrgydelrhdlarmfgiegqledpqtsdwklvyvaenaillv
gddpweefvncvqsikilssaevqq

  • Chain 'F':
    Sequence, based on SEQRES records:
    >4nj6F (F:)
gshmmrtytavqkrgsvgrsidvnryrgydelrhdlarmfgiegqledpqtsdwklvyva
henaillvgddpweefvncvqsikilssaevqqms

    Sequence, based on observed residues (ATOM records):
    >4nj6F (F:)
tytavqkrgsvgrsidvnryrgydelrhdlarmfgiegqledpqtsdwklvyvahenail
lvgddpweefvncvqsikilssaevqqms

  • Chain 'G':
    Sequence, based on SEQRES records:
    >4nj6G (G:)
gshmmrtytavqkrgsvgrsidvnryrgydelrhdlarmfgiegqledpqtsdwklvyva
henaillvgddpweefvncvqsikilssaevqqms

    Sequence, based on observed residues (ATOM records):
    >4nj6G (G:)
tytavqkrgsvgrsidvnryrgydelrhdlarmfgiegqledpqtsdwklvyvahenail
lvgddpweefvncvqsikilssaevqqm

  • Chain 'H':
    Sequence, based on SEQRES records:
    >4nj6H (H:)
gshmmrtytavqkrgsvgrsidvnryrgydelrhdlarmfgiegqledpqtsdwklvyva
henaillvgddpweefvncvqsikilssaevqqms

    Sequence, based on observed residues (ATOM records):
    >4nj6H (H:)
tytavqkrgsvgrsidvnryrgydelrhdlarmfgiegqledpqtsdwklvyvaenaill
vgddpweefvncvqsikilssaevqqm

  • Chain 'I':
    Sequence, based on SEQRES records:
    >4nj6I (I:)
gshmmrtytavqkrgsvgrsidvnryrgydelrhdlarmfgiegqledpqtsdwklvyva
henaillvgddpweefvncvqsikilssaevqqms

    Sequence, based on observed residues (ATOM records):
    >4nj6I (I:)
rtytavqkrgsvgrsidvnryrgydelrhdlarmfgiegqledpqtsdwklvyvenaill
vgddpweefvncvqsikilssaevqq

  • Chain 'J':
    Sequence, based on SEQRES records:
    >4nj6J (J:)
gshmmrtytavqkrgsvgrsidvnryrgydelrhdlarmfgiegqledpqtsdwklvyva
henaillvgddpweefvncvqsikilssaevqqms

    Sequence, based on observed residues (ATOM records):
    >4nj6J (J:)
tytavqkrgsvgrsidvnryrgydelrhdlarmfgiegqletsdwklvyvaenaillvgd
dpweefvncvqsikilssaevq

  • Chain 'K':
    Sequence, based on SEQRES records:
    >4nj6K (K:)
gshmmrtytavqkrgsvgrsidvnryrgydelrhdlarmfgiegqledpqtsdwklvyva
henaillvgddpweefvncvqsikilssaevqqms

    Sequence, based on observed residues (ATOM records):
    >4nj6K (K:)
rtytavqkrgsvgrsidvnryrgydelrhdlarmfgiegqledpqtsdwklvyvahenai
llvgddpweefvncvqsikilssaevqqm

  • Chain 'L':
    Sequence, based on SEQRES records:
    >4nj6L (L:)
gshmmrtytavqkrgsvgrsidvnryrgydelrhdlarmfgiegqledpqtsdwklvyva
henaillvgddpweefvncvqsikilssaevqqms

    Sequence, based on observed residues (ATOM records):
    >4nj6L (L:)
tytavqkrgsvgrsidvnryrgydelrhdlarmfgiegqledpdwklvyahenaillvgd
dpweefvncvqsikilssaevqqm

  • Chain 'M':
    Sequence, based on SEQRES records:
    >4nj6M (M:)
gshmmrtytavqkrgsvgrsidvnryrgydelrhdlarmfgiegqledpqtsdwklvyva
henaillvgddpweefvncvqsikilssaevqqms

    Sequence, based on observed residues (ATOM records):
    >4nj6M (M:)
rtytavqkrgsvgrsidvnryrgydelrhdlarmfgiegqledpqtsdwklvyvahenai
llvgddpweefvncvqsikilssaevqq

  • Chain 'N':
    Sequence, based on SEQRES records:
    >4nj6N (N:)
gshmmrtytavqkrgsvgrsidvnryrgydelrhdlarmfgiegqledpqtsdwklvyva
henaillvgddpweefvncvqsikilssaevqqms

    Sequence, based on observed residues (ATOM records):
    >4nj6N (N:)
tytavqkrgsvgrsidvnryrgydelrhdlarmfgiqledsdwklvyvaenaillvgddp
weefvncvqsikilssaevqqm

  • Chain 'O':
    Sequence, based on SEQRES records:
    >4nj6O (O:)
gshmmrtytavqkrgsvgrsidvnryrgydelrhdlarmfgiegqledpqtsdwklvyva
henaillvgddpweefvncvqsikilssaevqqms

    Sequence, based on observed residues (ATOM records):
    >4nj6O (O:)
ytavqkrgsvgrsidvnryrgydelrhdlarmfgiegqledpqtsdwklvyvaenaillv
gddpweefvncvqsikilssaevqqm

  • Chain 'P':
    Sequence, based on SEQRES records:
    >4nj6P (P:)
gshmmrtytavqkrgsvgrsidvnryrgydelrhdlarmfgiegqledpqtsdwklvyva
henaillvgddpweefvncvqsikilssaevqqms

    Sequence, based on observed residues (ATOM records):
    >4nj6P (P:)
tytavqkrgsvgrsidvnryrgydelrhdlarmfgiegqledpqtsdwklvyvaenaill
vgddpweefvncvqsikilssaevqqm