PDB entry 4ncf

View 4ncf on RCSB PDB site
Description: crystal structure of eukaryotic translation initiation factor eif5b (399-852) from saccharomyces cerevisiae in complex with gdp
Deposited on 2013-10-24, released 2014-07-09
The last revision was dated 2018-03-07, with a file datestamp of 2018-03-02.
Experiment type: XRAY
Resolution: 3.02 Å
R-factor: N/A
AEROSPACI score: 0.13 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: eukaryotic translation initiation factor 5b
    Species: Saccharomyces cerevisiae [TaxId:559292]
    Gene: FUN12, NM_001178180, YAL035W
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: eukaryotic translation initiation factor 5b
    Species: Saccharomyces cerevisiae [TaxId:559292]
    Gene: FUN12, NM_001178180, YAL035W
    Database cross-references and differences (RAF-indexed):
  • Heterogens: GDP, MG

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4ncfA (A:)
shmnkkdlrspiccilghvdtgktklldkirqtnvqggeaggitqqigatyfpidaikak
tkvmaeyekqtfdvpgllvidtpghesfsnlrsrgsslcniailvidimhgleqqtiesi
kllrdrkapfvvalnkidrlydwkaipnnsfrdsfakqsravqeefqsryskiqlelaeq
glnselyfqnknmskyvsivptsavtgegvpdllwllleltqkrmskqlmylshveatil
evkvvegfgttidvilsngylregdrivlcgmngpivtniralltpqplrelrlkseyvh
hkevkaalgvkiaandlekavsgsrllvvgpeddedelmddvmddltglldsvdttgkgv
vvqastlgslealldflkdmkipvmsiglgpvykrdvmkastmlekapeyavmlcfdvkv
dkeaeqyaeqegikifnadviyhlfdsftayqeklle

    Sequence, based on observed residues (ATOM records):
    >4ncfA (A:)
dlrspiccilghvdtgktklldkirqtnvqaggitqqigatyfpidaikaktkvmaeyek
qtfdvpgllvidtpghesfsnlrsrgsslcniailvidimhgleqqtiesikllrdrkap
fvvalnkidrlydwkaipnnsfrdsfakqsravqeefqsryskiqlelaeqglnselyfq
nknmskyvsivptsavtgegvpdllwllleltqkrmskqlmylshveatilevkvvegfg
ttidvilsngylregdrivlcgmngpivtniralltpqplrelrlkseyvhhkevkaalg
vkiaandlekavsgsrllvvgpeddedelmddvmddltglldsvdttgkgvvvqastlgs
lealldflkdmkipvmsiglgpvykrdvmkastmlekapeyavmlcfdvkvdkeaeqyae
qegikifnadviyhlfdsftayqeklle

  • Chain 'B':
    Sequence, based on SEQRES records:
    >4ncfB (B:)
shmnkkdlrspiccilghvdtgktklldkirqtnvqggeaggitqqigatyfpidaikak
tkvmaeyekqtfdvpgllvidtpghesfsnlrsrgsslcniailvidimhgleqqtiesi
kllrdrkapfvvalnkidrlydwkaipnnsfrdsfakqsravqeefqsryskiqlelaeq
glnselyfqnknmskyvsivptsavtgegvpdllwllleltqkrmskqlmylshveatil
evkvvegfgttidvilsngylregdrivlcgmngpivtniralltpqplrelrlkseyvh
hkevkaalgvkiaandlekavsgsrllvvgpeddedelmddvmddltglldsvdttgkgv
vvqastlgslealldflkdmkipvmsiglgpvykrdvmkastmlekapeyavmlcfdvkv
dkeaeqyaeqegikifnadviyhlfdsftayqeklle

    Sequence, based on observed residues (ATOM records):
    >4ncfB (B:)
kdlrspiccilghvdtgktklldkirqtgitqqigatyfpidaikaktkvmaeyekqtfd
vpgllvidtpnlrsrgsslcniailvidimhgleqqtiesikllrdrkapfvvalnkidr
lydwkaipnnsfrdsfakqsravqeefqsryskiqlelaeqglnselyfqnknmskyvsi
vptsavtgegvpdllwllleltqkrmskqlmylshveatilevkvvegfgttidvilsng
ylregdrivlcgmngpivtniralltpqplrelrlkseyvhhkevkaalgvkiaandlek
avsgsrllvvgpeddedelmddvmddltglldskgvvvqastlgslealldflkdmkipv
msiglgpvykrdvmkastmlekapeyavmlcfdvkvdkeaeqyaeqegikifnadviyhl
fdsftayqe