PDB entry 4n8y

View 4n8y on RCSB PDB site
Description: Crystal structure of a trap periplasmic solute binding protein from bradyrhizobium sp. btai1 b (bbta_0128), target EFI-510056 (bbta_0128), complex with alpha/beta-d-galacturonate
Class: transport protein
Keywords: TRAP PERIPLASMIC SOLUTE BINDING FAMILY, ENZYME FUNCTION INITIATIVE, EFI, Structural Genomics, TRANSPORT PROTEIN
Deposited on 2013-10-18, released 2013-11-20
The last revision prior to the SCOPe 2.07 freeze date was dated 2015-10-14, with a file datestamp of 2015-10-09.
Experiment type: XRAY
Resolution: 1.5 Å
R-factor: N/A
AEROSPACI score: 0.49 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Putative TRAP-type C4-dicarboxylate transport system, binding periplasmic protein (DctP subunit)
    Species: Bradyrhizobium sp. [TaxId:288000]
    Gene: BBta_0128
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d4n8ya_
  • Chain 'B':
    Compound: Putative TRAP-type C4-dicarboxylate transport system, binding periplasmic protein (DctP subunit)
    Species: Bradyrhizobium sp. [TaxId:288000]
    Gene: BBta_0128
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d4n8yb_
  • Heterogens: ADA, GTR, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4n8yA (A:)
mkaltgiiaaavlavsaplatardfrsadvhpadyptveavkfmgkqlaaasggklgvkv
fpngalgsekdtieqlkigaldmmrinssplnnfvpetvalclpfvfrdtqhmrnvldgp
igdeilaamepaglvglayydsgarsiytvkapvksladlkglkirvqqsdlwvgmiqsl
ganptpmpygevytalktglvdaaennwpsyessrhfeaakfynitehslapevlvmskk
vwdtlskedqalvrkaakdsvpvmrklwdereqasrkaveaagvqvvtvankqefvdamk
pvyqkfagdeklsslvkriqdtkaenlyfq

    Sequence, based on observed residues (ATOM records): (download) 
    >4n8yA (A:)
rdfrsadvhpadyptveavkfmgkqlaaasggklgvkvfpngalgsekdtieqlkigald
mmrinssplnnfvpetvalclpfvfrdtqhmrnvldgpigdeilaamepaglvglayyds
garsiytvkapvksladlkglkirvqqsdlwvgmiqslganptpmpygevytalktglvd
aaennwpsyessrhfeaakfynitehslapevlvmskkvwdtlskedqalvrkaakdsvp
vmrklwdereqasrkaveaagvqvvtvankqefvdamkpvyqkfagdeklsslvkriqdt

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4n8yB (B:)
mkaltgiiaaavlavsaplatardfrsadvhpadyptveavkfmgkqlaaasggklgvkv
fpngalgsekdtieqlkigaldmmrinssplnnfvpetvalclpfvfrdtqhmrnvldgp
igdeilaamepaglvglayydsgarsiytvkapvksladlkglkirvqqsdlwvgmiqsl
ganptpmpygevytalktglvdaaennwpsyessrhfeaakfynitehslapevlvmskk
vwdtlskedqalvrkaakdsvpvmrklwdereqasrkaveaagvqvvtvankqefvdamk
pvyqkfagdeklsslvkriqdtkaenlyfq

    Sequence, based on observed residues (ATOM records): (download) 
    >4n8yB (B:)
rdfrsadvhpadyptveavkfmgkqlaaasggklgvkvfpngalgsekdtieqlkigald
mmrinssplnnfvpetvalclpfvfrdtqhmrnvldgpigdeilaamepaglvglayyds
garsiytvkapvksladlkglkirvqqsdlwvgmiqslganptpmpygevytalktglvd
aaennwpsyessrhfeaakfynitehslapevlvmskkvwdtlskedqalvrkaakdsvp
vmrklwdereqasrkaveaagvqvvtvankqefvdamkpvyqkfagdeklsslvkriqdt