PDB entry 4n8c

View 4n8c on RCSB PDB site
Description: three-dimensional structure of the extracellular domain of matrix protein 2 of influenza a virus
Deposited on 2013-10-17, released 2014-10-22
The last revision was dated 2017-11-15, with a file datestamp of 2017-11-10.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: N/A
AEROSPACI score: 0.43 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'H':
    Compound: Heavy chain of monoclonal antibody
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 4N8C (0-End)
  • Chain 'I':
    Compound: Heavy chain of monoclonal antibody
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 4N8C (0-220)
  • Chain 'L':
    Compound: Light chain of monoclonal antibody
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 4N8C (0-End)
  • Chain 'M':
    Compound: Light chain of monoclonal antibody
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 4N8C (0-219)
  • Chain 'X':
    Compound: Extracellular domain of influenza Matrix protein 2
    Species: Influenza A virus (A/Puerto Rico/8/1934(H1N1)), synthetic [TaxId:211044]
    Database cross-references and differences (RAF-indexed):
    • PDB 4N8C
  • Chain 'Y':
    Compound: Extracellular domain of influenza Matrix protein 2
    Species: Influenza A virus (A/Puerto Rico/8/1934(H1N1)), synthetic [TaxId:211044]
    Database cross-references and differences (RAF-indexed):
    • PDB 4N8C
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'H':
    Sequence, based on SEQRES records:
    >4n8cH (H:)
qvqlqqsgpevvrpgvsvrisckgsgytftdyamhwvkqshaksldwigvigtdngntny
nqkfkgkatmtvdkssntaymelgrltsedsaiyycarrdrddvwfaywgqgtlvtvsaa
kttapsvyplapvcgdttgssvtlgclvkgyfpepvtltwnsgslssgvhtfpavlqsdl
ytlsssvtvtsstwpsqsitcnvahpasstkvdkkieprgp

    Sequence, based on observed residues (ATOM records):
    >4n8cH (H:)
qvqlqqsgpevvrpgvsvrisckgsgytftdyamhwvkqshaksldwigvigtdngntny
nqkfkgkatmtvdkssntaymelgrltsedsaiyycarrdrddvwfaywgqgtlvtvsaa
kttapsvyplapvcgdttgssvtlgclvkgyfpepvtltwnsgslssgvhtfpavlqsdl
ytlsssvtvtsstwpsqsitcnvahpasstkvdkkieprg

  • Chain 'I':
    Sequence; same for both SEQRES and ATOM records:
    >4n8cI (I:)
qvqlqqsgpevvrpgvsvrisckgsgytftdyamhwvkqshaksldwigvigtdngntny
nqkfkgkatmtvdkssntaymelgrltsedsaiyycarrdrddvwfaywgqgtlvtvsaa
kttapsvyplapvcgdttgssvtlgclvkgyfpepvtltwnsgslssgvhtfpavlqsdl
ytlsssvtvtsstwpsqsitcnvahpasstkvdkkieprgp

  • Chain 'L':
    Sequence, based on SEQRES records:
    >4n8cL (L:)
divmsqspsslavsvgekvsmsckssqslfyssyqkdllawyqqkpgqspklliywastr
esgvpdrftgsgsgtdftltissvkaedlavyfcqqyytypltfgagtklelkradaapt
vsifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstys
msstltltkdeyerhnsytceathktstspivksfnrnec

    Sequence, based on observed residues (ATOM records):
    >4n8cL (L:)
divmsqspsslavsvgekvsmsckssqslfyssyqkdllawyqqkpgqspklliywastr
esgvpdrftgsgsgtdftltissvkaedlavyfcqqyytypltfgagtklelkradaapt
vsifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstys
msstltltkdeyerhnsytceathktstspivksfnrne

  • Chain 'M':
    Sequence; same for both SEQRES and ATOM records:
    >4n8cM (M:)
divmsqspsslavsvgekvsmsckssqslfyssyqkdllawyqqkpgqspklliywastr
esgvpdrftgsgsgtdftltissvkaedlavyfcqqyytypltfgagtklelkradaapt
vsifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstys
msstltltkdeyerhnsytceathktstspivksfnrnec

  • Chain 'X':
    Sequence, based on SEQRES records:
    >4n8cX (X:)
mslltevetpirnewgcrcndss

    Sequence, based on observed residues (ATOM records):
    >4n8cX (X:)
slltevetpirnewg

  • Chain 'Y':
    Sequence, based on SEQRES records:
    >4n8cY (Y:)
mslltevetpirnewgcrcndss

    Sequence, based on observed residues (ATOM records):
    >4n8cY (Y:)
lltevetpirnewg