PDB entry 4n48

View 4n48 on RCSB PDB site
Description: cap-specific mrna (nucleoside-2'-o-)-methyltransferase 1 protein in complex with capped rna fragment
Deposited on 2013-10-08, released 2014-01-22
The last revision was dated 2018-01-24, with a file datestamp of 2018-01-19.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: N/A
AEROSPACI score: 0.18 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1
    Species: Homo sapiens [TaxId:9606]
    Gene: FTSJD2, KIAA0082, MTR1
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1
    Species: Homo sapiens [TaxId:9606]
    Gene: FTSJD2, KIAA0082, MTR1
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: capped RNA
    Species: synthetic, synthetic
  • Chain 'G':
    Compound: capped RNA
    Species: synthetic, synthetic
  • Heterogens: SAM, MGT, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4n48A (A:)
gamrglgltlrgfdqelnvdwrdepepsaceqvswfpectteipdtqemsdwmvvgkrkm
iiedetefcgeellhsvlqcksvfdvldgeemrrartranpyemirgvfflnraamkman
mdfvfdrmftnprdsygkplvkdreaellyfadvcagpggfseyvlwrkkwhakgfgmtl
kgpndfkledfysasselfepyygeggidgdgditrpenisafrnfvldntdrkgvhflm
adggfsvegqenlqeilskqlllcqflmalsivrtgghficktfdlftpfsvglvyllyc
cfervclfkpitsrpanseryvvckglkvgiddvrdylfavniklnqlrntdsdvnlvvp
levikgdheftdymirsneshcslqikalakihafvqdttlseprqaeirkeclrlwgip
dqarvaps

    Sequence, based on observed residues (ATOM records):
    >4n48A (A:)
vdwrdepepsaceqvswfpectteipdtqemsdwmvvgkrkmiiedetefcgeellhsvl
qcksvfdvldgeemrrartranpyemirgvfflnraamkmanmdfvfdrmftnprdsygk
plvkdrellyfadvcagpggfseyvlwrkkwhakgfgmtlkgpndfkledfselfepyyg
eggidgdgditrpenisafrnfvldntdrkgvhflmadggfsvegqenlqeilskqlllc
qflmalsivrtgghficktfdlftpfsvglvyllyccfervclfkpitsrpanseryvvc
kglkvgiddvrdylfavniklnqlrntdsdvnlvvplevikgdheftdymirsneshcsl
qikalakihafvqdttlseprqaeirkeclrlwgipdqarv

  • Chain 'B':
    Sequence, based on SEQRES records:
    >4n48B (B:)
gamrglgltlrgfdqelnvdwrdepepsaceqvswfpectteipdtqemsdwmvvgkrkm
iiedetefcgeellhsvlqcksvfdvldgeemrrartranpyemirgvfflnraamkman
mdfvfdrmftnprdsygkplvkdreaellyfadvcagpggfseyvlwrkkwhakgfgmtl
kgpndfkledfysasselfepyygeggidgdgditrpenisafrnfvldntdrkgvhflm
adggfsvegqenlqeilskqlllcqflmalsivrtgghficktfdlftpfsvglvyllyc
cfervclfkpitsrpanseryvvckglkvgiddvrdylfavniklnqlrntdsdvnlvvp
levikgdheftdymirsneshcslqikalakihafvqdttlseprqaeirkeclrlwgip
dqarvaps

    Sequence, based on observed residues (ATOM records):
    >4n48B (B:)
vdwrdepepsaceqvswfpectteipdtqemsdwmvvgkrkmiiedetefcgeellhsvl
qcksvfdvldgeemrrartranpyemirgvfflnraamkmanmdfvfdrmftnprdsygk
plvkdrellyfadvcagpggfseyvlwrkkwhakgfgmtlkgpndfkledfysasselfe
pyygeggidgdgditrpenisafrnfvldntdrkgvhflmadggfsvegqenlqeilskq
lllcqflmalsivrtgghficktfdlftpfsvglvyllyccfervclfkpitsrpanser
yvvckglkvgiddvrdylfavniklnqlrntdsdvnlvvplevikgdheftdymirsnes
hcslqikalakihafvqdttlseprqaeirkeclrlwgipdqarv

  • Chain 'D':
    No sequence available.

  • Chain 'G':
    No sequence available.