PDB entry 4n2y

View 4n2y on RCSB PDB site
Description: Crystal structure of orotidine 5'-monophosphate decarboxylase from Archaeoglobus fulgidus
Class: lyase
Keywords: tim barrel, LYASE
Deposited on 2013-10-06, released 2013-10-30
The last revision prior to the SCOPe 2.03 freeze date was dated 2013-11-06, with a file datestamp of 2013-11-01.
Experiment type: XRAY
Resolution: 1.55 Å
R-factor: 0.185
AEROSPACI score: 0.53 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: orotidine 5'-phosphate decarboxylase
    Species: Archaeoglobus fulgidus [TaxId:2234]
    Gene: pyrF, AF_0929
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d4n2ya_
  • Chain 'B':
    Compound: orotidine 5'-phosphate decarboxylase
    Species: Archaeoglobus fulgidus [TaxId:2234]
    Gene: pyrF, AF_0929
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d4n2yb_
  • Chain 'C':
    Compound: orotidine 5'-phosphate decarboxylase
    Species: Archaeoglobus fulgidus [TaxId:2234]
    Gene: pyrF, AF_0929
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d4n2yc_
  • Chain 'D':
    Compound: orotidine 5'-phosphate decarboxylase
    Species: Archaeoglobus fulgidus [TaxId:2234]
    Gene: pyrF, AF_0929
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d4n2yd_
  • Heterogens: GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4n2yA (A:)
mgsshhhhhhssglvprgshmkqlilaldvmdgekameiakkvaehvdrikvnyplvlsa
gvgimkrlseikpviadfkiadvpytssliariafensaesvivhgfvgsdtlrevcrva
eefggkvyavtelsspggeefmsavslkivekakeagchgliapstrierlreirkaagd
meilcpgigaqkgsieavkyadgiivgrgiyasgnpaeearklrrvlki

    Sequence, based on observed residues (ATOM records): (download) 
    >4n2yA (A:)
mkqlilaldvmdgekameiakkvaehvdrikvnyplvlsagvgimkrlseikpviadfki
advpytssliariafensaesvivhgfvgsdtlrevcrvaeefggkvyavtelsspggee
fmsavslkivekakeagchgliapstrierlreirkaagdmeilcpgigaqkgsieavky
adgiivgrgiyasgnpaeearklrrvlki

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4n2yB (B:)
mgsshhhhhhssglvprgshmkqlilaldvmdgekameiakkvaehvdrikvnyplvlsa
gvgimkrlseikpviadfkiadvpytssliariafensaesvivhgfvgsdtlrevcrva
eefggkvyavtelsspggeefmsavslkivekakeagchgliapstrierlreirkaagd
meilcpgigaqkgsieavkyadgiivgrgiyasgnpaeearklrrvlki

    Sequence, based on observed residues (ATOM records): (download) 
    >4n2yB (B:)
mkqlilaldvmdgekameiakkvaehvdrikvnyplvlsagvgimkrlseikpviadfki
advpytssliariafensaesvivhgfvgsdtlrevcrvaeefggkvyavtelsspggee
fmsavslkivekakeagchgliapstrierlreirkaagdmeilcpieavkyadgiivgr
giyasgnpaeearklrrvlki

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4n2yC (C:)
mgsshhhhhhssglvprgshmkqlilaldvmdgekameiakkvaehvdrikvnyplvlsa
gvgimkrlseikpviadfkiadvpytssliariafensaesvivhgfvgsdtlrevcrva
eefggkvyavtelsspggeefmsavslkivekakeagchgliapstrierlreirkaagd
meilcpgigaqkgsieavkyadgiivgrgiyasgnpaeearklrrvlki

    Sequence, based on observed residues (ATOM records): (download) 
    >4n2yC (C:)
mkqlilaldvmdgekameiakkvaehvdrikvnyplvlsagvgimkrlseikpviadfki
advpytssliariafensaesvivhgfvgsdtlrevcrvaeefggkvyavtelsspggee
fmsavslkivekakeagchgliapstrierlreirkaagdmeilcpieavkyadgiivgr
giyasgnpaeearklrrvlki

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4n2yD (D:)
mgsshhhhhhssglvprgshmkqlilaldvmdgekameiakkvaehvdrikvnyplvlsa
gvgimkrlseikpviadfkiadvpytssliariafensaesvivhgfvgsdtlrevcrva
eefggkvyavtelsspggeefmsavslkivekakeagchgliapstrierlreirkaagd
meilcpgigaqkgsieavkyadgiivgrgiyasgnpaeearklrrvlki

    Sequence, based on observed residues (ATOM records): (download) 
    >4n2yD (D:)
mkqlilaldvmdgekameiakkvaehvdrikvnyplvlsagvgimkrlseikpviadfki
advpytssliariafensaesvivhgfvgsdtlrevcrvaeefggkvyavtelsspggee
fmsavslkivekakeagchgliapstrierlreirkaagdmeilcpsieavkyadgiivg
rgiyasgnpaeearklrrvlki