PDB entry 4n09

View 4n09 on RCSB PDB site
Description: Structure of Trypanosoma brucei brucei adenosine kinase in complex with adenosine and AMPPNP
Class: transferase
Keywords: anion hole, adenosine kinase, adenosine, AMPPNP, TRANSFERASE
Deposited on 2013-10-01, released 2014-01-15
The last revision prior to the SCOPe 2.08 freeze date was dated 2014-02-12, with a file datestamp of 2014-02-07.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.188
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: adenosine kinase
    Species: Trypanosoma brucei brucei [TaxId:999953]
    Gene: Tb927.6.2360
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4n09a_
  • Chain 'B':
    Compound: adenosine kinase
    Species: Trypanosoma brucei brucei [TaxId:999953]
    Gene: Tb927.6.2360
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4n09b_
  • Chain 'C':
    Compound: adenosine kinase
    Species: Trypanosoma brucei brucei [TaxId:999953]
    Gene: Tb927.6.2360
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4n09c_
  • Chain 'D':
    Compound: adenosine kinase
    Species: Trypanosoma brucei brucei [TaxId:999953]
    Gene: Tb927.6.2360
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4n09d_
  • Heterogens: ADN, ADP, EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4n09A (A:)
gpamssaplrvyvqcnplldvsahvsdeflvkyglergtaillserqkgifddiekmpnv
ryvpggsglnvarvaqwmqqaykgkfvtyvgciaddrygkvlkeaaehegivmavehttk
agsgacavcitgkertlvadlgaanhlssehmrspavvramdesrifyfsgftltvdvnh
vlqacrkarevdglfminlsapfimqffsaqlgevlpytdiivanrheakefanmmkwdt
dcveeiarravsevpytgtkgrvvvftrdiestvlatkdgvetvpvpqldqdkvidmnga
gdafmggflsayavgkdlrrccetghytaqeviqrdgcsfpekpsfsp

    Sequence, based on observed residues (ATOM records): (download) 
    >4n09A (A:)
mssaplrvyvqcnplldvsahvsdeflvkyglergtaillserqkgifddiekmpnvryv
pggsglnvarvaqwmqqaykgkfvtyvgciaddrygkvlkeaaehegivmavehttkags
gacavcitgkertlvadlgaanhlssehmrspavvramdesrifyfsgftltvdvnhvlq
acrkarevdglfminlsapfimqffsaqlgevlpytdiivanrheakefanmmkwdtdcv
eeiarravsevpytgtkgrvvvftrdiestvlatkdgvetvpvpqldqdkvidmngagda
fmggflsayavgkdlrrccetghytaqeviqrdgcsfpekpsfsp

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4n09B (B:)
gpamssaplrvyvqcnplldvsahvsdeflvkyglergtaillserqkgifddiekmpnv
ryvpggsglnvarvaqwmqqaykgkfvtyvgciaddrygkvlkeaaehegivmavehttk
agsgacavcitgkertlvadlgaanhlssehmrspavvramdesrifyfsgftltvdvnh
vlqacrkarevdglfminlsapfimqffsaqlgevlpytdiivanrheakefanmmkwdt
dcveeiarravsevpytgtkgrvvvftrdiestvlatkdgvetvpvpqldqdkvidmnga
gdafmggflsayavgkdlrrccetghytaqeviqrdgcsfpekpsfsp

    Sequence, based on observed residues (ATOM records): (download) 
    >4n09B (B:)
mssaplrvyvqcnplldvsahvsdeflvkyglergtaillserqkgifddiekmpnvryv
pggsglnvarvaqwmqqaykgkfvtyvgciaddrygkvlkeaaehegivmavehttkags
gacavcitgkertlvadlgaanhlssehmrspavvramdesrifyfsgftltvdvnhvlq
acrkarevdglfminlsapfimqffsaqlgevlpytdiivanrheakefanmmkwdtdcv
eeiarravsevpytgtkgrvvvftrdiestvlatkdgvetvpvpqldqdkvidmngagda
fmggflsayavgkdlrrccetghytaqeviqrdgcsfpekpsfsp

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4n09C (C:)
gpamssaplrvyvqcnplldvsahvsdeflvkyglergtaillserqkgifddiekmpnv
ryvpggsglnvarvaqwmqqaykgkfvtyvgciaddrygkvlkeaaehegivmavehttk
agsgacavcitgkertlvadlgaanhlssehmrspavvramdesrifyfsgftltvdvnh
vlqacrkarevdglfminlsapfimqffsaqlgevlpytdiivanrheakefanmmkwdt
dcveeiarravsevpytgtkgrvvvftrdiestvlatkdgvetvpvpqldqdkvidmnga
gdafmggflsayavgkdlrrccetghytaqeviqrdgcsfpekpsfsp

    Sequence, based on observed residues (ATOM records): (download) 
    >4n09C (C:)
mssaplrvyvqcnplldvsahvsdeflvkyglergtaillserqkgifddiekmpnvryv
pggsglnvarvaqwmqqaykgkfvtyvgciaddrygkvlkeaaehegivmavehttkags
gacavcitgkertlvadlgaanhlssehmrspavvramdesrifyfsgftltvdvnhvlq
acrkarevdglfminlsapfimqffsaqlgevlpytdiivanrheakefanmmkwdtdcv
eeiarravsevpytgtkgrvvvftrdiestvlatkdgvetvpvpqldqdkvidmngagda
fmggflsayavgkdlrrccetghytaqeviqrdgcsfpekpsfsp

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4n09D (D:)
gpamssaplrvyvqcnplldvsahvsdeflvkyglergtaillserqkgifddiekmpnv
ryvpggsglnvarvaqwmqqaykgkfvtyvgciaddrygkvlkeaaehegivmavehttk
agsgacavcitgkertlvadlgaanhlssehmrspavvramdesrifyfsgftltvdvnh
vlqacrkarevdglfminlsapfimqffsaqlgevlpytdiivanrheakefanmmkwdt
dcveeiarravsevpytgtkgrvvvftrdiestvlatkdgvetvpvpqldqdkvidmnga
gdafmggflsayavgkdlrrccetghytaqeviqrdgcsfpekpsfsp

    Sequence, based on observed residues (ATOM records): (download) 
    >4n09D (D:)
saplrvyvqcnplldvsahvsdeflvkyglergtaillserqkgifddiekmpnvryvpg
gsglnvarvaqwmqqaykgkfvtyvgciaddrygkvlkeaaehegivmavehttkagsga
cavcitgkertlvadlgaanhlssehmrspavvramdesrifyfsgftltvdvnhvlqac
rkarevdglfminlsapfimqffsaqlgevlpytdiivanrheakefanmmkwdtdcvee
iarravsevpytgtkgrvvvftrdiestvlatkdgvetvpvpqldqdkvidmngagdafm
ggflsayavgkdlrrccetghytaqeviqrdgcsfpekpsfs