PDB entry 4mtk

View 4mtk on RCSB PDB site
Description: crystal structure of pa0091 vgrg1, the central spike of the type vi secretion system
Deposited on 2013-09-19, released 2014-10-01
The last revision was dated 2017-11-15, with a file datestamp of 2017-11-10.
Experiment type: XRAY
Resolution: 3.32 Å
R-factor: N/A
AEROSPACI score: 0.1 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: VgrG1
    Species: PSEUDOMONAS AERUGINOSA [TaxId:208964]
    Gene: PA0091, vgrG1
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: VgrG1
    Species: PSEUDOMONAS AERUGINOSA [TaxId:208964]
    Gene: PA0091, vgrG1
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: VgrG1
    Species: PSEUDOMONAS AERUGINOSA [TaxId:208964]
    Gene: PA0091, vgrG1
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: VgrG1
    Species: PSEUDOMONAS AERUGINOSA [TaxId:208964]
    Gene: PA0091, vgrG1
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: VgrG1
    Species: PSEUDOMONAS AERUGINOSA [TaxId:208964]
    Gene: PA0091, vgrG1
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: VgrG1
    Species: PSEUDOMONAS AERUGINOSA [TaxId:208964]
    Gene: PA0091, vgrG1
    Database cross-references and differences (RAF-indexed):
  • Heterogens: SO4, TAM, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4mtkA (A:)
mqltrlvqvdcplgpdvlllqrmegreelgrlfayelhlvsenpnlpleqllgkpmslsl
elpggsrrffhgivarcsqvaghgqfagyqatlrpwpwlltrtsdcrifqnqsvpeiikq
vfrnlgfsdfedaltrpyreweycvqyretsfdfisrlmeqegiyywfrheqkrhilvls
daygahrspggyasvpyypptlghrerdhffdwqmarevqpgsltlndydfqrpgarlev
rsniarphaaadyplydypgeyvqsqdgeqyarnrieaiqaqhervrlrgvvrgigaghl
frlsgyprddqnreylvvgaeyrvvqelyetgsggagsqfeseldcidasqsfrllpqtp
vpvvrgpqtavvvgpkgeeiwtdqygrvkvhfhwdrhdqsnensscwirvsqawagknwg
smqiprigqevivsflegdpdrpiitgrvynaeqtvpyelpanatqsgmksrsskggtpa
nfneirmedkkgaeqlyihaernqdnlvendaslsvghdrnksighdelarignnrtrav
klndtllvggaksdsvtgtylieagaqirlvcgksvvefnadgtinisgsafnlyasgng
nidtggrldlnsggasevdakgkgvqgtidgqvqamfpppakg

    Sequence, based on observed residues (ATOM records):
    >4mtkA (A:)
rlvqvdcplgpdvlllqrmegreelgrlfayelhlvsenpnlpleqllgkpmslslelpg
gsrrffhgivarcsqvaghgqfagyqatlrpwpwlltrtsdcrifqnqsvpeiikqvfrn
lgfsdfedaltrpyreweycvqyretsfdfisrlmeqegiyywfrheqkrhilvlsdayg
ahrspggyasvpyypptlghrerdhffdwqmarevqpgsltlndydfqrpgarlevrsni
arphaaadyplydypgeyvqsqdgeqyarnrieaiqaqhervrlrgvvrgigaghlfrls
gyprddqnreylvvgaeyrvvqelsqfeseldcidasqsfrllpqtpvpvvrgpqtavvv
gpkgeeiwtdqygrvkvhfhwdrhdqsnensscwirvsqawagknwgsmqiprigqeviv
sflegdpdrpiitgrvynaeqtvpyelpanatqsgmksrsskggtpanfneirmedkkga
eqlyihaernqdnlvendaslsvghdrnksighdelarignnrtravklndtllvggaks
dsvtgtylieagaqirlvcgksvvefnadgtinisgsafnlyasgngnidtggrldlnsg
gasevdakgkgvqgtidgqvqamfppp

  • Chain 'B':
    Sequence, based on SEQRES records:
    >4mtkB (B:)
mqltrlvqvdcplgpdvlllqrmegreelgrlfayelhlvsenpnlpleqllgkpmslsl
elpggsrrffhgivarcsqvaghgqfagyqatlrpwpwlltrtsdcrifqnqsvpeiikq
vfrnlgfsdfedaltrpyreweycvqyretsfdfisrlmeqegiyywfrheqkrhilvls
daygahrspggyasvpyypptlghrerdhffdwqmarevqpgsltlndydfqrpgarlev
rsniarphaaadyplydypgeyvqsqdgeqyarnrieaiqaqhervrlrgvvrgigaghl
frlsgyprddqnreylvvgaeyrvvqelyetgsggagsqfeseldcidasqsfrllpqtp
vpvvrgpqtavvvgpkgeeiwtdqygrvkvhfhwdrhdqsnensscwirvsqawagknwg
smqiprigqevivsflegdpdrpiitgrvynaeqtvpyelpanatqsgmksrsskggtpa
nfneirmedkkgaeqlyihaernqdnlvendaslsvghdrnksighdelarignnrtrav
klndtllvggaksdsvtgtylieagaqirlvcgksvvefnadgtinisgsafnlyasgng
nidtggrldlnsggasevdakgkgvqgtidgqvqamfpppakg

    Sequence, based on observed residues (ATOM records):
    >4mtkB (B:)
rlvqvdcplgpdvlllqrmegreelgrlfayelhlvsenpnlpleqllgkpmslslelpg
gsrrffhgivarcsqvaghgqfagyqatlrpwpwlltrtsdcrifqnqsvpeiikqvfrn
lgfsdfedaltrpyreweycvqyretsfdfisrlmeqegiyywfrheqkrhilvlsdayg
ahrspggyasvpyypptlghrerdhffdwqmarevqpgsltlndydfqrpgarlevrsni
arphaaadyplydypgeyvqsqdgeqyarnrieaiqaqhervrlrgvvrgigaghlfrls
gyprddqnreylvvgaeyrvvqelsqfeseldcidasqsfrllpqtpvpvvrgpqtavvv
gpkgeeiwtdqygrvkvhfhwdrhdqsnensscwirvsqawagknwgsmqiprigqeviv
sflegdpdrpiitgrvynaeqtvpyelpanatqsgmksrsskggtpanfneirmedkkga
eqlyihaernqdnlvendaslsvghdrnksighdelarignnrtravklndtllvggaks
dsvtgtylieagaqirlvcgksvvefnadgtinisgsafnlyasgngnidtggrldlnsg
gasevdakgkgvqgtidgqvqamfppp

  • Chain 'C':
    Sequence, based on SEQRES records:
    >4mtkC (C:)
mqltrlvqvdcplgpdvlllqrmegreelgrlfayelhlvsenpnlpleqllgkpmslsl
elpggsrrffhgivarcsqvaghgqfagyqatlrpwpwlltrtsdcrifqnqsvpeiikq
vfrnlgfsdfedaltrpyreweycvqyretsfdfisrlmeqegiyywfrheqkrhilvls
daygahrspggyasvpyypptlghrerdhffdwqmarevqpgsltlndydfqrpgarlev
rsniarphaaadyplydypgeyvqsqdgeqyarnrieaiqaqhervrlrgvvrgigaghl
frlsgyprddqnreylvvgaeyrvvqelyetgsggagsqfeseldcidasqsfrllpqtp
vpvvrgpqtavvvgpkgeeiwtdqygrvkvhfhwdrhdqsnensscwirvsqawagknwg
smqiprigqevivsflegdpdrpiitgrvynaeqtvpyelpanatqsgmksrsskggtpa
nfneirmedkkgaeqlyihaernqdnlvendaslsvghdrnksighdelarignnrtrav
klndtllvggaksdsvtgtylieagaqirlvcgksvvefnadgtinisgsafnlyasgng
nidtggrldlnsggasevdakgkgvqgtidgqvqamfpppakg

    Sequence, based on observed residues (ATOM records):
    >4mtkC (C:)
rlvqvdcplgpdvlllqrmegreelgrlfayelhlvsenpnlpleqllgkpmslslelpg
gsrrffhgivarcsqvaghgqfagyqatlrpwpwlltrtsdcrifqnqsvpeiikqvfrn
lgfsdfedaltrpyreweycvqyretsfdfisrlmeqegiyywfrheqkrhilvlsdayg
ahrspggyasvpyypptlghrerdhffdwqmarevqpgsltlndydfqrpgarlevrsni
arphaaadyplydypgeyvqsqdgeqyarnrieaiqaqhervrlrgvvrgigaghlfrls
gyprddqnreylvvgaeyrvvqelsqfeseldcidasqsfrllpqtpvpvvrgpqtavvv
gpkgeeiwtdqygrvkvhfhwdrhdqsnensscwirvsqawagknwgsmqiprigqeviv
sflegdpdrpiitgrvynaeqtvpyelpanatqsgmksrsskggtpanfneirmedkkga
eqlyihaernqdnlvendaslsvghdrnksighdelarignnrtravklndtllvggaks
dsvtgtylieagaqirlvcgksvvefnadgtinisgsafnlyasgngnidtggrldlnsg
gasevdakgkgvqgtidgqvqamfppp

  • Chain 'D':
    Sequence, based on SEQRES records:
    >4mtkD (D:)
mqltrlvqvdcplgpdvlllqrmegreelgrlfayelhlvsenpnlpleqllgkpmslsl
elpggsrrffhgivarcsqvaghgqfagyqatlrpwpwlltrtsdcrifqnqsvpeiikq
vfrnlgfsdfedaltrpyreweycvqyretsfdfisrlmeqegiyywfrheqkrhilvls
daygahrspggyasvpyypptlghrerdhffdwqmarevqpgsltlndydfqrpgarlev
rsniarphaaadyplydypgeyvqsqdgeqyarnrieaiqaqhervrlrgvvrgigaghl
frlsgyprddqnreylvvgaeyrvvqelyetgsggagsqfeseldcidasqsfrllpqtp
vpvvrgpqtavvvgpkgeeiwtdqygrvkvhfhwdrhdqsnensscwirvsqawagknwg
smqiprigqevivsflegdpdrpiitgrvynaeqtvpyelpanatqsgmksrsskggtpa
nfneirmedkkgaeqlyihaernqdnlvendaslsvghdrnksighdelarignnrtrav
klndtllvggaksdsvtgtylieagaqirlvcgksvvefnadgtinisgsafnlyasgng
nidtggrldlnsggasevdakgkgvqgtidgqvqamfpppakg

    Sequence, based on observed residues (ATOM records):
    >4mtkD (D:)
rlvqvdcplgpdvlllqrmegreelgrlfayelhlvsenpnlpleqllgkpmslslelpg
gsrrffhgivarcsqvaghgqfagyqatlrpwpwlltrtsdcrifqnqsvpeiikqvfrn
lgfsdfedaltrpyreweycvqyretsfdfisrlmeqegiyywfrheqkrhilvlsdayg
ahrspggyasvpyypptlghrerdhffdwqmarevqpgsltlndydfqrpgarlevrsni
arphaaadyplydypgeyvqsqdgeqyarnrieaiqaqhervrlrgvvrgigaghlfrls
gyprddqnreylvvgaeyrvvqelsqfeseldcidasqsfrllpqtpvpvvrgpqtavvv
gpkgeeiwtdqygrvkvhfhwdrhdqsnensscwirvsqawagknwgsmqiprigqeviv
sflegdpdrpiitgrvynaeqtvpyelpanatqsgmksrsskggtpanfneirmedkkga
eqlyihaernqdnlvendaslsvghdrnksighdelarignnrtravklndtllvggaks
dsvtgtylieagaqirlvcgksvvefnadgtinisgsafnlyasgngnidtggrldlnsg
gasevdakgkgvqgtidgqvqamfppp

  • Chain 'E':
    Sequence, based on SEQRES records:
    >4mtkE (E:)
mqltrlvqvdcplgpdvlllqrmegreelgrlfayelhlvsenpnlpleqllgkpmslsl
elpggsrrffhgivarcsqvaghgqfagyqatlrpwpwlltrtsdcrifqnqsvpeiikq
vfrnlgfsdfedaltrpyreweycvqyretsfdfisrlmeqegiyywfrheqkrhilvls
daygahrspggyasvpyypptlghrerdhffdwqmarevqpgsltlndydfqrpgarlev
rsniarphaaadyplydypgeyvqsqdgeqyarnrieaiqaqhervrlrgvvrgigaghl
frlsgyprddqnreylvvgaeyrvvqelyetgsggagsqfeseldcidasqsfrllpqtp
vpvvrgpqtavvvgpkgeeiwtdqygrvkvhfhwdrhdqsnensscwirvsqawagknwg
smqiprigqevivsflegdpdrpiitgrvynaeqtvpyelpanatqsgmksrsskggtpa
nfneirmedkkgaeqlyihaernqdnlvendaslsvghdrnksighdelarignnrtrav
klndtllvggaksdsvtgtylieagaqirlvcgksvvefnadgtinisgsafnlyasgng
nidtggrldlnsggasevdakgkgvqgtidgqvqamfpppakg

    Sequence, based on observed residues (ATOM records):
    >4mtkE (E:)
rlvqvdcplgpdvlllqrmegreelgrlfayelhlvsenpnlpleqllgkpmslslelpg
gsrrffhgivarcsqvaghgqfagyqatlrpwpwlltrtsdcrifqnqsvpeiikqvfrn
lgfsdfedaltrpyreweycvqyretsfdfisrlmeqegiyywfrheqkrhilvlsdayg
ahrspggyasvpyypptlghrerdhffdwqmarevqpgsltlndydfqrpgarlevrsni
arphaaadyplydypgeyvqsqdgeqyarnrieaiqaqhervrlrgvvrgigaghlfrls
gyprddqnreylvvgaeyrvvqelsqfeseldcidasqsfrllpqtpvpvvrgpqtavvv
gpkgeeiwtdqygrvkvhfhwdrhdqsnensscwirvsqawagknwgsmqiprigqeviv
sflegdpdrpiitgrvynaeqtvpyelpanatqsgmksrsskggtpanfneirmedkkga
eqlyihaernqdnlvendaslsvghdrnksighdelarignnrtravklndtllvggaks
dsvtgtylieagaqirlvcgksvvefnadgtinisgsafnlyasgngnidtggrldlnsg
gasevdakgkgvqgtidgqvqamfppp

  • Chain 'F':
    Sequence, based on SEQRES records:
    >4mtkF (F:)
mqltrlvqvdcplgpdvlllqrmegreelgrlfayelhlvsenpnlpleqllgkpmslsl
elpggsrrffhgivarcsqvaghgqfagyqatlrpwpwlltrtsdcrifqnqsvpeiikq
vfrnlgfsdfedaltrpyreweycvqyretsfdfisrlmeqegiyywfrheqkrhilvls
daygahrspggyasvpyypptlghrerdhffdwqmarevqpgsltlndydfqrpgarlev
rsniarphaaadyplydypgeyvqsqdgeqyarnrieaiqaqhervrlrgvvrgigaghl
frlsgyprddqnreylvvgaeyrvvqelyetgsggagsqfeseldcidasqsfrllpqtp
vpvvrgpqtavvvgpkgeeiwtdqygrvkvhfhwdrhdqsnensscwirvsqawagknwg
smqiprigqevivsflegdpdrpiitgrvynaeqtvpyelpanatqsgmksrsskggtpa
nfneirmedkkgaeqlyihaernqdnlvendaslsvghdrnksighdelarignnrtrav
klndtllvggaksdsvtgtylieagaqirlvcgksvvefnadgtinisgsafnlyasgng
nidtggrldlnsggasevdakgkgvqgtidgqvqamfpppakg

    Sequence, based on observed residues (ATOM records):
    >4mtkF (F:)
rlvqvdcplgpdvlllqrmegreelgrlfayelhlvsenpnlpleqllgkpmslslelpg
gsrrffhgivarcsqvaghgqfagyqatlrpwpwlltrtsdcrifqnqsvpeiikqvfrn
lgfsdfedaltrpyreweycvqyretsfdfisrlmeqegiyywfrheqkrhilvlsdayg
ahrspggyasvpyypptlghrerdhffdwqmarevqpgsltlndydfqrpgarlevrsni
arphaaadyplydypgeyvqsqdgeqyarnrieaiqaqhervrlrgvvrgigaghlfrls
gyprddqnreylvvgaeyrvvqelsqfeseldcidasqsfrllpqtpvpvvrgpqtavvv
gpkgeeiwtdqygrvkvhfhwdrhdqsnensscwirvsqawagknwgsmqiprigqeviv
sflegdpdrpiitgrvynaeqtvpyelpanatqsgmksrsskggtpanfneirmedkkga
eqlyihaernqdnlvendaslsvghdrnksighdelarignnrtravklndtllvggaks
dsvtgtylieagaqirlvcgksvvefnadgtinisgsafnlyasgngnidtggrldlnsg
gasevdakgkgvqgtidgqvqamfppp