PDB entry 4mmi

View 4mmi on RCSB PDB site
Description: Crystal structure of heparan sulfate lyase HepC mutant from Pedobacter heparinus
Deposited on 2013-09-09, released 2014-01-29
The last revision was dated 2014-02-26, with a file datestamp of 2014-02-21.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.207
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Heparinase III protein
    Species: Pedobacter heparinus [TaxId:984]
    Gene: HepC
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q59289 (Start-634)
      • engineered mutation (4)
      • engineered mutation (632)
      • expression tag (635-639)
  • Heterogens: CA, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4mmiA (A:)
    qsssvtrkdfdhinleysglekvnkavaagnyddaakallayyrekskarepdfsnaekp
    adirqpidkvtremadkalvhqfqphkgygyfdygkdinwqmwpvkdnevrwqlhrvkww
    qamalvyhatgdekyarewvyqysdwarknplglsqdndkfvwrplevsdrvqslpptfs
    lfvnspaftpaflmeflnsyhqqadylsthyaeqgnhrlfeaqrnlfagvsfpefkdspr
    wrqtgisvlnteikkqvyadgmqfelspiyhvaaidiflkaygsakrvnlekefpqsyvq
    tvenmimalisislpdyntpmfgdswitdknfrmaqfaswarvfpanqaikyfatdgkqg
    kapnflskalsnagfytfrsgwdknatvmvlkasppgefhaqpdngtfelfikgrnftpd
    agvfvysgdeaimklrnwyrqtrihstltldnqnmvitkarqnkwetgnnldvltytnps
    ypnldhqrsvlfinkkyflvidraigeatgnlgvhwqlkedsnpvfdktknrvyttyrdg
    nnlmiqslnadrtslneeegkvsyvynkelkrpafvfekpkknagtqnfvsivypydgqk
    apeisirenkgndfekgklnltltingkqqlvsvplehhhhhh
    

    Sequence, based on observed residues (ATOM records):
    >4mmiA (A:)
    vtrkdfdhinleysglekvnkavaagnyddaakallayyrekskarepdfsnaekpadir
    qpidkvtremadkalvhqfqphkgygyfdygkdinwqmwpvkdnevrwqlhrvkwwqama
    lvyhatgdekyarewvyqysdwarknplglsqdndkfvwrplevsdrvqslpptfslfvn
    spaftpaflmeflnsyhqqadylsthyaeqgnhrlfeaqrnlfagvsfpefkdsprwrqt
    gisvlnteikkqvyadgmqfelspiyhvaaidiflkaygsakrvnlekefpqsyvqtven
    mimalisislpdyntpmfgdswitdknfrmaqfaswarvfpanqaikyfatdgkqgkapn
    flskalsnagfytfrsgwdknatvmvlkasppgefhaqpdngtfelfikgrnftpdagvf
    vysgdeaimklrnwyrqtrihstltldnqnmvitkarqnkwetgnnldvltytnpsypnl
    dhqrsvlfinkkyflvidraigeatgnlgvhwqlkedsnpvfdktknrvyttyrdgnnlm
    iqslnadrtslneeegkvsyvynkelkrpafvfekpkknagtqnfvsivypydgqkapei
    sirenkgndfekgklnltltingkqqlvsvplehhh