PDB entry 4mkv
View 4mkv on RCSB PDB site
Description: Structure of Pisum sativum Rubisco with ABA
Class: lyase
Keywords: rubisco, ribulose-1,5-bisphosphate, garden pea, abscisic acid, LYASE
Deposited on
2013-09-05, released
2013-10-16
The last revision prior to the SCOPe 2.03 freeze date was dated
2013-10-16, with a file datestamp of
2013-10-11.
Experiment type: XRAY
Resolution: 2.15 Å
R-factor: 0.164
AEROSPACI score: 0.45
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: ribulose bisphosphate carboxylase large chain
Species: PISUM SATIVUM [TaxId:3888]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d4mkva1, d4mkva2 - Chain 'B':
Compound: ribulose bisphosphate carboxylase large chain
Species: PISUM SATIVUM [TaxId:3888]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d4mkvb1, d4mkvb2 - Chain 'C':
Compound: ribulose bisphosphate carboxylase large chain
Species: PISUM SATIVUM [TaxId:3888]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d4mkvc1, d4mkvc2 - Chain 'D':
Compound: ribulose bisphosphate carboxylase large chain
Species: PISUM SATIVUM [TaxId:3888]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d4mkvd1, d4mkvd2 - Chain 'S':
Compound: Ribulose bisphosphate carboxylase small chain 3A, chloroplastic
Species: PISUM SATIVUM [TaxId:3888]
Database cross-references and differences (RAF-indexed):
- Uniprot P07689 (0-122)
- conflict (46)
- conflict (90-91)
- conflict (95)
- conflict (120-121)
Domains in SCOPe 2.03: d4mkvs_ - Chain 'T':
Compound: Ribulose bisphosphate carboxylase small chain 3A, chloroplastic
Species: PISUM SATIVUM [TaxId:3888]
Database cross-references and differences (RAF-indexed):
- Uniprot P07689 (0-122)
- conflict (46)
- conflict (90-91)
- conflict (95)
- conflict (120-121)
Domains in SCOPe 2.03: d4mkvt_ - Chain 'U':
Compound: Ribulose bisphosphate carboxylase small chain 3A, chloroplastic
Species: PISUM SATIVUM [TaxId:3888]
Database cross-references and differences (RAF-indexed):
- Uniprot P07689 (0-122)
- conflict (46)
- conflict (90-91)
- conflict (95)
- conflict (120-121)
Domains in SCOPe 2.03: d4mkvu_ - Chain 'V':
Compound: Ribulose bisphosphate carboxylase small chain 3A, chloroplastic
Species: PISUM SATIVUM [TaxId:3888]
Database cross-references and differences (RAF-indexed):
- Uniprot P07689 (0-122)
- conflict (46)
- conflict (90-91)
- conflict (95)
- conflict (120-121)
Domains in SCOPe 2.03: d4mkvv_ - Heterogens: RUB, PO4, A8S, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>4mkvA (A:)
gfkagvkdykltyytpdyqtkdtdilaafrvtpqpgvppeeagaavaaesstgtwttvwt
dgltsldrykgrcyeiepvpgednqfiayvaypldlfeegsvtnmftsivgnvfgfkalr
alrledlripyayvktfqgpphgiqverdklnkygrpllgctikpklglsaknygravye
clrggldftkddenvnsqpfmrwrdrflfcaeaiyksqaetgeikghylnatagtceeml
kravfarelgvpivmhdyltggftanttlshycrdnglllhihramhavidrqknhgmhf
rvlakalrlsggdhihagtvvgklegereitlgfvdllrddyikkdrsrgiyftqdwvsl
pgvipvasggihvwhmpalteifgddsvlqfgggtlghpwgnapgavanrvaleacvqar
negrdlaregnaiireackwspelaaacevwkeikfef
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>4mkvB (B:)
gfkagvkdykltyytpdyqtkdtdilaafrvtpqpgvppeeagaavaaesstgtwttvwt
dgltsldrykgrcyeiepvpgednqfiayvaypldlfeegsvtnmftsivgnvfgfkalr
alrledlripyayvktfqgpphgiqverdklnkygrpllgctikpklglsaknygravye
clrggldftkddenvnsqpfmrwrdrflfcaeaiyksqaetgeikghylnatagtceeml
kravfarelgvpivmhdyltggftanttlshycrdnglllhihramhavidrqknhgmhf
rvlakalrlsggdhihagtvvgklegereitlgfvdllrddyikkdrsrgiyftqdwvsl
pgvipvasggihvwhmpalteifgddsvlqfgggtlghpwgnapgavanrvaleacvqar
negrdlaregnaiireackwspelaaacevwkeikfef
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>4mkvC (C:)
gfkagvkdykltyytpdyqtkdtdilaafrvtpqpgvppeeagaavaaesstgtwttvwt
dgltsldrykgrcyeiepvpgednqfiayvaypldlfeegsvtnmftsivgnvfgfkalr
alrledlripyayvktfqgpphgiqverdklnkygrpllgctikpklglsaknygravye
clrggldftkddenvnsqpfmrwrdrflfcaeaiyksqaetgeikghylnatagtceeml
kravfarelgvpivmhdyltggftanttlshycrdnglllhihramhavidrqknhgmhf
rvlakalrlsggdhihagtvvgklegereitlgfvdllrddyikkdrsrgiyftqdwvsl
pgvipvasggihvwhmpalteifgddsvlqfgggtlghpwgnapgavanrvaleacvqar
negrdlaregnaiireackwspelaaacevwkeikfef
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>4mkvD (D:)
gfkagvkdykltyytpdyqtkdtdilaafrvtpqpgvppeeagaavaaesstgtwttvwt
dgltsldrykgrcyeiepvpgednqfiayvaypldlfeegsvtnmftsivgnvfgfkalr
alrledlripyayvktfqgpphgiqverdklnkygrpllgctikpklglsaknygravye
clrggldftkddenvnsqpfmrwrdrflfcaeaiyksqaetgeikghylnatagtceeml
kravfarelgvpivmhdyltggftanttlshycrdnglllhihramhavidrqknhgmhf
rvlakalrlsggdhihagtvvgklegereitlgfvdllrddyikkdrsrgiyftqdwvsl
pgvipvasggihvwhmpalteifgddsvlqfgggtlghpwgnapgavanrvaleacvqar
negrdlaregnaiireackwspelaaacevwkeikfef
- Chain 'S':
Sequence; same for both SEQRES and ATOM records: (download)
>4mkvS (S:)
mqvwppigkkkfetlsylppltrdqllkeveyllrkgwvpclefelkkgfvyrehnkspg
yydgrywtmwklpmfgttdasqvlkeldevkkayprafvriigfdnvrqvqcisfiahtp
agy
- Chain 'T':
Sequence; same for both SEQRES and ATOM records: (download)
>4mkvT (T:)
mqvwppigkkkfetlsylppltrdqllkeveyllrkgwvpclefelkkgfvyrehnkspg
yydgrywtmwklpmfgttdasqvlkeldevkkayprafvriigfdnvrqvqcisfiahtp
agy
- Chain 'U':
Sequence; same for both SEQRES and ATOM records: (download)
>4mkvU (U:)
mqvwppigkkkfetlsylppltrdqllkeveyllrkgwvpclefelkkgfvyrehnkspg
yydgrywtmwklpmfgttdasqvlkeldevkkayprafvriigfdnvrqvqcisfiahtp
agy
- Chain 'V':
Sequence; same for both SEQRES and ATOM records: (download)
>4mkvV (V:)
mqvwppigkkkfetlsylppltrdqllkeveyllrkgwvpclefelkkgfvyrehnkspg
yydgrywtmwklpmfgttdasqvlkeldevkkayprafvriigfdnvrqvqcisfiahtp
agy