PDB entry 4mkk

View 4mkk on RCSB PDB site
Description: Crystal structure of C115A mutant L-methionine gamma-lyase from Citrobacter freundii modified by allicine
Class: lyase
Keywords: pyridoxal-5'-phosphate, PLP-dependent enzyme, Aminotransferase class-V, lyase, allicine
Deposited on 2013-09-05, released 2014-11-12
The last revision prior to the SCOPe 2.08 freeze date was dated 2014-12-31, with a file datestamp of 2014-12-26.
Experiment type: XRAY
Resolution: 1.45 Å
R-factor: 0.14
AEROSPACI score: 0.61 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: methionine gamma-lyase
    Species: Citrobacter freundii [TaxId:546]
    Gene: megL
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q84AR1
      • engineered mutation (114)
      • conflict (131-132)
      • conflict (136)
    Domains in SCOPe 2.08: d4mkka_
  • Heterogens: PGE, NA, CL, K, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4mkkA (A:)
msdxrtygfntqivhagqqpdpstgalstpifqtstfvfdsaeqgaarfaleesgyiytr
lgnpttdalekklavlergeaglatasgisaitttlltlcqqgdhivsasaiygathafl
shsmpkfginvsfvdaakpeeiraamrpetkvvyietpanptlslvdietvagiahqqga
llvvdntfmspycqqplqlgadivvhsvtkyinghgdviggiivgkqefidqarfvglkd
itggxmspfnawltlrgvktlgirmerhcenalkiarfleghpsitrvyypglsshpqye
lgqrqmslpggiisfeiaggleagrrminsvelcllavslgdtetliqhpasmthspvap
eerlkagitdglirlsvgledpediindlehairkatf

    Sequence, based on observed residues (ATOM records): (download) 
    >4mkkA (A:)
sdxrtygfntqivhagqqpdpstgalstpifqtstfvfdsaeqgaarfytrlgnpttdal
ekklavlergeaglatasgisaitttlltlcqqgdhivsasaiygathaflshsmpkfgi
nvsfvdaakpeeiraamrpetkvvyietpanptlslvdietvagiahqqgallvvdntfm
spycqqplqlgadivvhsvtkyinghgdviggiivgkqefidqarfvglkditggxmspf
nawltlrgvktlgirmerhcenalkiarfleghpsitrvyypglsshpqyelgqrqmslp
ggiisfeiaggleagrrminsvelcllavslgdtetliqhpasmthspvapeerlkagit
dglirlsvgledpediindlehairkat