PDB entry 4mkj

View 4mkj on RCSB PDB site
Description: Crystal structure of L-methionine gamma-lyase from Citrobacter freundii modified by allicine
Class: lyase
Keywords: pyridoxal-5'-phosphate, PLP-dependent enzyme, lyase, Aminotransferase class-V, allicine
Deposited on 2013-09-05, released 2014-11-12
The last revision prior to the SCOPe 2.08 freeze date was dated 2014-12-31, with a file datestamp of 2014-12-26.
Experiment type: XRAY
Resolution: 1.85 Å
R-factor: 0.157
AEROSPACI score: 0.45 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: methionine gamma-lyase
    Species: Citrobacter freundii [TaxId:546]
    Gene: megL
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q84AR1
      • conflict (131-132)
      • conflict (136)
    Domains in SCOPe 2.08: d4mkja_
  • Heterogens: 1PE, PGE, NA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4mkjA (A:)
msdxrtygfntqivhagqqpdpstgalstpifqtstfvfdsaeqgaarfaleesgyiytr
lgnpttdalekklavlergeaglatasgisaitttlltlcqqgdhivsasaiygxthafl
shsmpkfginvsfvdaakpeeiraamrpetkvvyietpanptlslvdietvagiahqqga
llvvdntfmspycqqplqlgadivvhsvtkyinghgdviggiivgkqefidqarfvglkd
itggxmspfnawltlrgvktlgirmerhcenalkiarfleghpsitrvyypglsshpqye
lgqrqmslpggiisfeiaggleagrrminsvelcllavslgdtetliqhpasmthspvap
eerlkagitdglirlsvgledpediindlehairkatf

    Sequence, based on observed residues (ATOM records): (download) 
    >4mkjA (A:)
sdxrtygfntqivhagqqpdpstgalstpifqtstfvfdsaeqgaarfytrlgnpttdal
ekklavlergeaglatasgisaitttlltlcqqgdhivsasaiygxthaflshsmpkfgi
nvsfvdaakpeeiraamrpetkvvyietpanptlslvdietvagiahqqgallvvdntfm
spycqqplqlgadivvhsvtkyinghgdviggiivgkqefidqarfvglkditggxmspf
nawltlrgvktlgirmerhcenalkiarfleghpsitrvyypglsshpqyelgqrqmslp
ggiisfeiaggleagrrminsvelcllavslgdtetliqhpasmthspvapeerlkagit
dglirlsvgledpediindlehairkat