PDB entry 4mdo

View 4mdo on RCSB PDB site
Description: Crystal structure of a GH1 beta-glucosidase from the fungus Humicola insolens
Class: hydrolase
Keywords: Glycoside Hydrolase Family 1, TIM barrel, retaining enzyme, HYDROLASE
Deposited on 2013-08-23, released 2014-06-25
The last revision prior to the SCOPe 2.05 freeze date was dated 2014-06-25, with a file datestamp of 2014-06-20.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.172
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Beta-glucosidase
    Species: Humicola grisea var. thermoidea [TaxId:5528]
    Gene: bgl4
    Database cross-references and differences (RAF-indexed):
    • Uniprot O93784 (23-498)
      • expression tag (22)
    Domains in SCOPe 2.05: d4mdoa_
  • Heterogens: TRS, PEG, SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4mdoA (A:)
mgsshhhhhhssglvprgshmasmslppdfkwgfataayqiegsvnedgrgpsiwdtfca
ipgkiadgssgavacdsykrtkediallkelgansyrfsiswsriiplggrndpinqkgi
dhyvkfvddlieagitpfitlfhwdlpdaldkryggflnkeefaadfenyarimfkaipk
ckhwitfnepwcsailgyntgyfapghtsdrskspvgdsarepwivghniliaharavka
yredfkptqggeigitlngdatlpwdpedpadieacdrkiefaiswfadpiyfgkypdsm
rkqlgdrlpeftpeevalvkgsndfygmnhytanyikhktgvppeddflgnletlfynky
gdcigpetqsfwlrphaqgfrdllnwlskrygypkiyvtengtslkgendmpleqvledd
frvkyfndyvramaaavaedgcnvrgylawslldnfewaegyetrfgvtyvdyandqkry
pkksakslkplfdslirke

    Sequence, based on observed residues (ATOM records): (download) 
    >4mdoA (A:)
smslppdfkwgfataayqiegsvnedgrgpsiwdtfcaipgkiadgssgavacdsykrtk
ediallkelgansyrfsiswsriiplggrndpinqkgidhyvkfvddlieagitpfitlf
hwdlpdaldkryggflnkeefaadfenyarimfkaipkckhwitfnepwcsailgyntgy
fapghtsdrskspvgdsarepwivghniliaharavkayredfkptqggeigitlngdat
lpwdpedpadieacdrkiefaiswfadpiyfgkypdsmrkqlgdrlpeftpeevalvkgs
ndfygmnhytanyikhktgvppeddflgnletlfynkygdcigpetqsfwlrphaqgfrd
llnwlskrygypkiyvtengtslkgendmpleqvleddfrvkyfndyvramaaavaedgc
nvrgylawslldnfewaegyetrfgvtyvdyandqkrypkksakslkplfdslirke