PDB entry 4mcj

View 4mcj on RCSB PDB site
Description: crystal structure of a putative nucleoside deoxyribosyltransferase (bdi_0649) from parabacteroides distasonis atcc 8503 at 2.40 a resolution
Deposited on 2013-08-21, released 2013-09-04
The last revision was dated 2018-01-24, with a file datestamp of 2018-01-19.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Uncharacterized protein
    Species: Parabacteroides distasonis [TaxId:435591]
    Gene: BDI_0649
    Database cross-references and differences (RAF-indexed):
    • Uniprot A6L9R1 (1-153)
      • leader sequence (0)
  • Chain 'B':
    Compound: Uncharacterized protein
    Species: Parabacteroides distasonis [TaxId:435591]
    Gene: BDI_0649
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Uncharacterized protein
    Species: Parabacteroides distasonis [TaxId:435591]
    Gene: BDI_0649
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Uncharacterized protein
    Species: Parabacteroides distasonis [TaxId:435591]
    Gene: BDI_0649
    Database cross-references and differences (RAF-indexed):
    • Uniprot A6L9R1 (1-153)
      • leader sequence (0)
  • Chain 'E':
    Compound: Uncharacterized protein
    Species: Parabacteroides distasonis [TaxId:435591]
    Gene: BDI_0649
    Database cross-references and differences (RAF-indexed):
    • Uniprot A6L9R1 (1-End)
      • leader sequence (0)
  • Chain 'F':
    Compound: Uncharacterized protein
    Species: Parabacteroides distasonis [TaxId:435591]
    Gene: BDI_0649
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: Uncharacterized protein
    Species: Parabacteroides distasonis [TaxId:435591]
    Gene: BDI_0649
    Database cross-references and differences (RAF-indexed):
    • Uniprot A6L9R1 (1-153)
      • leader sequence (0)
  • Chain 'H':
    Compound: Uncharacterized protein
    Species: Parabacteroides distasonis [TaxId:435591]
    Gene: BDI_0649
    Database cross-references and differences (RAF-indexed):
  • Chain 'I':
    Compound: Uncharacterized protein
    Species: Parabacteroides distasonis [TaxId:435591]
    Gene: BDI_0649
    Database cross-references and differences (RAF-indexed):
  • Chain 'J':
    Compound: Uncharacterized protein
    Species: Parabacteroides distasonis [TaxId:435591]
    Gene: BDI_0649
    Database cross-references and differences (RAF-indexed):
  • Heterogens: CL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4mcjA (A:)
gaqsevvvlypdtenkdldeavyqkiflagtidmgksvdwqkatcdwfralpegryllfn
prrdkglsgemsdfehqvnwelehlekadliimnilasskspitllemglfmrsgklrvi
cepgfyrydnvrltcarygvplyqnmddflktmr

    Sequence, based on observed residues (ATOM records):
    >4mcjA (A:)
gaqsevvvlypdtenkdldeavyqkiflagtidmdwqkatcdwfralpegryllfnprrd
kglsgemsdfehqvnwelehlekadliimnilasskspitllemglfmrsgklrvicepg
fyrydnvrltcarygvplyqnmddflktmr

  • Chain 'B':
    Sequence, based on SEQRES records:
    >4mcjB (B:)
gaqsevvvlypdtenkdldeavyqkiflagtidmgksvdwqkatcdwfralpegryllfn
prrdkglsgemsdfehqvnwelehlekadliimnilasskspitllemglfmrsgklrvi
cepgfyrydnvrltcarygvplyqnmddflktmr

    Sequence, based on observed residues (ATOM records):
    >4mcjB (B:)
aqsevvvlypdtenkdldeavyqkiflagtidmgksvdwqkatcdwfralpegryllfnp
rrdkglsgemsdfehqvnwelehlekadliimnilasskspitllemglfmrsgklrvic
epgfyrydnvrltcarygvplyqnmddflktm

  • Chain 'C':
    Sequence, based on SEQRES records:
    >4mcjC (C:)
gaqsevvvlypdtenkdldeavyqkiflagtidmgksvdwqkatcdwfralpegryllfn
prrdkglsgemsdfehqvnwelehlekadliimnilasskspitllemglfmrsgklrvi
cepgfyrydnvrltcarygvplyqnmddflktmr

    Sequence, based on observed residues (ATOM records):
    >4mcjC (C:)
qsevvvlypdtenkdldeavyqkiflagtidmgksvdwqkatcdwfralpegryllfnpr
rdkglsgemsdfehqvnwelehlekadliimnilasskspitllemglfmrsgklrvice
pgfyrydnvrltcarygvplyqnmddflktmr

  • Chain 'D':
    Sequence, based on SEQRES records:
    >4mcjD (D:)
gaqsevvvlypdtenkdldeavyqkiflagtidmgksvdwqkatcdwfralpegryllfn
prrdkglsgemsdfehqvnwelehlekadliimnilasskspitllemglfmrsgklrvi
cepgfyrydnvrltcarygvplyqnmddflktmr

    Sequence, based on observed residues (ATOM records):
    >4mcjD (D:)
gaqsevvvlypdtenkdldeavyqkiflagtidmdwqkatcdwfralpegryllfnprrd
kglsgemsdfehqvnwelehlekadliimnilasskspitllemglfmrsgklrvicepg
fyrydnvrltcarygvplyqnmddflktmr

  • Chain 'E':
    Sequence, based on SEQRES records:
    >4mcjE (E:)
gaqsevvvlypdtenkdldeavyqkiflagtidmgksvdwqkatcdwfralpegryllfn
prrdkglsgemsdfehqvnwelehlekadliimnilasskspitllemglfmrsgklrvi
cepgfyrydnvrltcarygvplyqnmddflktmr

    Sequence, based on observed residues (ATOM records):
    >4mcjE (E:)
gaqsevvvlypdtenkdldeavyqkiflagtidmdwqkatcdwfralpegryllfnprrd
kglsgemsdfehqvnwelehlekadliimnilasskspitllemglfmrsgklrvicepg
fyrydnvrltcarygvplyqnmddflktm

  • Chain 'F':
    Sequence, based on SEQRES records:
    >4mcjF (F:)
gaqsevvvlypdtenkdldeavyqkiflagtidmgksvdwqkatcdwfralpegryllfn
prrdkglsgemsdfehqvnwelehlekadliimnilasskspitllemglfmrsgklrvi
cepgfyrydnvrltcarygvplyqnmddflktmr

    Sequence, based on observed residues (ATOM records):
    >4mcjF (F:)
aqsevvvlypdtenkdldeavyqkiflagtidmgksvdwqkatcdwfralpegryllfnp
rrdkglsgemsdfehqvnwelehlekadliimnilasskspitllemglfmrsgklrvic
epgfyrydnvrltcarygvplyqnmddflktm

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records:
    >4mcjG (G:)
gaqsevvvlypdtenkdldeavyqkiflagtidmgksvdwqkatcdwfralpegryllfn
prrdkglsgemsdfehqvnwelehlekadliimnilasskspitllemglfmrsgklrvi
cepgfyrydnvrltcarygvplyqnmddflktmr

  • Chain 'H':
    Sequence, based on SEQRES records:
    >4mcjH (H:)
gaqsevvvlypdtenkdldeavyqkiflagtidmgksvdwqkatcdwfralpegryllfn
prrdkglsgemsdfehqvnwelehlekadliimnilasskspitllemglfmrsgklrvi
cepgfyrydnvrltcarygvplyqnmddflktmr

    Sequence, based on observed residues (ATOM records):
    >4mcjH (H:)
aqsevvvlypdtenkdldeavyqkiflagtidmgdwqkatcdwfralpegryllfnprrd
kglsgemsdfehqvnwelehlekadliimnilasskspitllemglfmrsgklrvicepg
fyrydnvrltcarygvplyqnmddflktm

  • Chain 'I':
    Sequence, based on SEQRES records:
    >4mcjI (I:)
gaqsevvvlypdtenkdldeavyqkiflagtidmgksvdwqkatcdwfralpegryllfn
prrdkglsgemsdfehqvnwelehlekadliimnilasskspitllemglfmrsgklrvi
cepgfyrydnvrltcarygvplyqnmddflktmr

    Sequence, based on observed residues (ATOM records):
    >4mcjI (I:)
aqsevvvlypdtenkdldeavyqkiflagtidvdwqkatcdwfralpegryllfnprrdk
glsgemsdfehqvnwelehlekadliimnilasskspitllemglfmrsgklrvicepgf
yrydnvrltcarygvplyqnmddflktmr

  • Chain 'J':
    Sequence, based on SEQRES records:
    >4mcjJ (J:)
gaqsevvvlypdtenkdldeavyqkiflagtidmgksvdwqkatcdwfralpegryllfn
prrdkglsgemsdfehqvnwelehlekadliimnilasskspitllemglfmrsgklrvi
cepgfyrydnvrltcarygvplyqnmddflktmr

    Sequence, based on observed residues (ATOM records):
    >4mcjJ (J:)
aqsevvvlypdtenkdldeavyqkiflagtidmgksvdwqkatcdwfralpegryllfnp
rrdkglsgemsdfehqvnwelehlekadliimnilasskspitllemglfmrsgklrvic
epgfyrydnvrltcarygvplyqnmddflktmr