PDB entry 4m70

View 4m70 on RCSB PDB site
Description: crystal structure of potato rx-cc domain in complex with rangap2-wpp domain
Deposited on 2013-08-12, released 2013-11-13
The last revision was dated 2017-06-28, with a file datestamp of 2017-06-23.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Rx protein
    Species: Solanum tuberosum [TaxId:4113]
    Gene: rx
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9XGF5 (4-End)
      • expression tag (2-3)
  • Chain 'B':
    Compound: Ran GTPase activating protein 2
    Species: Solanum tuberosum [TaxId:4113]
    Gene: RanGAP2
    Database cross-references and differences (RAF-indexed):
    • Uniprot I7JSB1 (1-End)
      • expression tag (0)
  • Chain 'E':
    Compound: Ran GTPase activating protein 2
    Species: Solanum tuberosum [TaxId:4113]
    Gene: RanGAP2
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: Rx protein
    Species: Solanum tuberosum [TaxId:4113]
    Gene: rx
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9XGF5 (4-End)
      • expression tag (1-3)
  • Chain 'I':
    Compound: Rx protein
    Species: Solanum tuberosum [TaxId:4113]
    Gene: rx
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9XGF5 (4-End)
      • expression tag (3)
  • Chain 'J':
    Compound: Ran GTPase activating protein 2
    Species: Solanum tuberosum [TaxId:4113]
    Gene: RanGAP2
    Database cross-references and differences (RAF-indexed):
  • Chain 'K':
    Compound: Ran GTPase activating protein 2
    Species: Solanum tuberosum [TaxId:4113]
    Gene: RanGAP2
    Database cross-references and differences (RAF-indexed):
  • Chain 'L':
    Compound: Rx protein
    Species: Solanum tuberosum [TaxId:4113]
    Gene: rx
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9XGF5 (4-End)
      • expression tag (0-3)
  • Chain 'Q':
    Compound: Rx protein
    Species: Solanum tuberosum [TaxId:4113]
    Gene: rx
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9XGF5 (4-End)
      • expression tag (3)
  • Chain 'R':
    Compound: Ran GTPase activating protein 2
    Species: synthetic construct, synthetic [TaxId:32630]
    Gene: RanGAP2, Rx
    Database cross-references and differences (RAF-indexed):
    • PDB 4M70
    • Uniprot I7JSB1 (23-58)
    • PDB 4M70
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4m70A (A:)
aagamayaavtslmrtihqsmeltgcdlqpfyeklkslrailekscnimgdhegltilev
eivevayttedmvdsesrnvflaqnleersramweiffvleqalecidstvkqwmatsds
mkdlkp

    Sequence, based on observed residues (ATOM records):
    >4m70A (A:)
gamayaavtslmrtihqsmeltgcdlqpfyeklkslraileltileveivevayttedmv
dsesrnvflaqnleersramweiffvleqalecidstvkqwmatsds

  • Chain 'B':
    Sequence, based on SEQRES records:
    >4m70B (B:)
aiklwppsentrkmlvermtnnlssptiftrkyrslskeeaaknaeeiedaaftianqhy
ekepdgdgssavqlyarecsklileilkkipksedkeis

    Sequence, based on observed residues (ATOM records):
    >4m70B (B:)
aiklwppsentrkmlvermtnnlssptiftrkyrslskeeaaknaeeiedaaftianqhy
ekepdgdgssavqlyarecsklileilkkip

  • Chain 'E':
    Sequence, based on SEQRES records:
    >4m70E (E:)
aiklwppsentrkmlvermtnnlssptiftrkyrslskeeaaknaeeiedaaftianqhy
ekepdgdgssavqlyarecsklileilkkipksedkeis

    Sequence, based on observed residues (ATOM records):
    >4m70E (E:)
iklwppsentrkmlvermtnnlssptiftrkyrslskeeaaknaeeiedaaftianqhye
kepdgdgssavqlyarecsklileilkk

  • Chain 'H':
    Sequence, based on SEQRES records:
    >4m70H (H:)
aagamayaavtslmrtihqsmeltgcdlqpfyeklkslrailekscnimgdhegltilev
eivevayttedmvdsesrnvflaqnleersramweiffvleqalecidstvkqwmatsds
mkdlkp

    Sequence, based on observed residues (ATOM records):
    >4m70H (H:)
agamayaavtslmrtihqsmeltgcdlqpfyeklkslrailehegltileveivevaytt
edmvdsesrnvflaqnleersramweiffvleqalecidstvkqwmatsdsm

  • Chain 'I':
    Sequence, based on SEQRES records:
    >4m70I (I:)
aagamayaavtslmrtihqsmeltgcdlqpfyeklkslrailekscnimgdhegltilev
eivevayttedmvdsesrnvflaqnleersramweiffvleqalecidstvkqwmatsds
mkdlkp

    Sequence, based on observed residues (ATOM records):
    >4m70I (I:)
amayaavtslmrtihqsmeltgcdlqpfyeklkslrailekgltileveivevayttedm
vdsesrnvflaqnleersramweiffvleqalecidstvkqwmatsds

  • Chain 'J':
    Sequence, based on SEQRES records:
    >4m70J (J:)
aiklwppsentrkmlvermtnnlssptiftrkyrslskeeaaknaeeiedaaftianqhy
ekepdgdgssavqlyarecsklileilkkipksedkeis

    Sequence, based on observed residues (ATOM records):
    >4m70J (J:)
iklwppsentrkmlvermtnnlssptiftrkyrslskeeaaknaeeiedaaftianqhye
kepdgdgssavqlyarecsklileilkki

  • Chain 'K':
    Sequence, based on SEQRES records:
    >4m70K (K:)
aiklwppsentrkmlvermtnnlssptiftrkyrslskeeaaknaeeiedaaftianqhy
ekepdgdgssavqlyarecsklileilkkipksedkeis

    Sequence, based on observed residues (ATOM records):
    >4m70K (K:)
kmlvermtnnlssptiftrkeeaaknaeeiedaaftiavqlyarecsklileilkk

  • Chain 'L':
    Sequence, based on SEQRES records:
    >4m70L (L:)
aagamayaavtslmrtihqsmeltgcdlqpfyeklkslrailekscnimgdhegltilev
eivevayttedmvdsesrnvflaqnleersramweiffvleqalecidstvkqwmatsds
mkdlkp

    Sequence, based on observed residues (ATOM records):
    >4m70L (L:)
aagamayaavtslmrtihqsmeltgcdlqpfyeklkslrailekegltileveivevayt
tedmvdsesrnvflaqnleersramweiffvleqalecidstvkqwmatsds

  • Chain 'Q':
    Sequence, based on SEQRES records:
    >4m70Q (Q:)
aagamayaavtslmrtihqsmeltgcdlqpfyeklkslrailekscnimgdhegltilev
eivevayttedmvdsesrnvflaqnleersramweiffvleqalecidstvkqwmatsds
mkdlkp

    Sequence, based on observed residues (ATOM records):
    >4m70Q (Q:)
amayaavtslmrtihqsmeltgcdlqpfyeklkslraileegltileveivevayttedm
vdsesrnvflaqnleersramweiffvleqalecidstvkqwmatsds

  • Chain 'R':
    Sequence, based on SEQRES records:
    >4m70R (R:)
xxxxxxxxxxxxxxxxxxxxxxxssptiftrkyrslskeeaaknaeeiedaaftianqhx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

    Sequence, based on observed residues (ATOM records):
    >4m70R (R:)
xxxxxxxxxxxssptifskeeaaknaeeiedaaftianqhxxxxxxxxxxxxxxxx