PDB entry 4m6v

View 4m6v on RCSB PDB site
Description: structure of the carboxyl transferase domain from rhizobium etli pyruvate carboxylase with pyruvate and biocytin
Deposited on 2013-08-11, released 2014-09-10
The last revision was dated 2018-01-31, with a file datestamp of 2018-01-26.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: N/A
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: pyruvate carboxylase
    Species: Rhizobium etli [TaxId:347834]
    Gene: pyc, RHE_CH04002
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: pyruvate carboxylase
    Species: Rhizobium etli [TaxId:347834]
    Gene: pyc, RHE_CH04002
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: pyruvate carboxylase
    Species: Rhizobium etli [TaxId:347834]
    Gene: pyc, RHE_CH04002
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: pyruvate carboxylase
    Species: Rhizobium etli [TaxId:347834]
    Gene: pyc, RHE_CH04002
    Database cross-references and differences (RAF-indexed):
  • Heterogens: ZN, MG, CL, PYR, BYT, GOL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4m6vA (A:)
mgsshhhhhhhhdydiptsenlyfqgllhqqvkrqdratklltyladvtvnghpeakdrp
kplenaarpvvpyangngvkdgtkqlldtlgpkkfgewmrnekrvlltdttmrdghqsll
atrmrtydiariagtyshalpnllslecwggatfdvsmrfltedpwerlaliregapnll
lqmllrgangvgytnypdnvvkyfvrqaakggidlfrvfdclnwvenmrvsmdaiaeenk
lceaaicytgdilnsarpkydlkyytnlavelekagahiiavkdmagllkpaaakvlfka
lreatglpihfhthdtsgiaaatvlaaveagvdavdaamdalsgntsqpclgsivealsg
serdpgldpawirrisfyweavrnqyaafesdlkgpasevylhempggqftnlkeqarsl
gletrwhqvaqayadanqmfgdivkvtpsskvvgdmalmmvsqdltvadvvspdrevsfp
esvvsmlkgdlgqppsgwpealqkkalkgekpytvrpgsllkeadldaerkviekklere
vsdfefasylmypkvftdfalasdtygpvsvlptpayfygladgeelfadiekgktlviv
nqavsatdsqgmvtvffelngqprrikvpdra

    Sequence, based on observed residues (ATOM records):
    >4m6vA (A:)
dratklltyladvtvnghpeakdrpkplenaarpvvpyangngvkdgtkqlldtlgpkkf
gewmrnekrvlltdttmrdghqsllatrmrtydiariagtyshalpnllslecwggatfd
vsmrfltedpwerlaliregapnlllqmllrgangvgytnypdnvvkyfvrqaakggidl
frvfdclnwvenmrvsmdaiaeenklceaaicytgdilnsarpkydlkyytnlaveleka
gahiiavkdmagllkpaaakvlfkalreatglpihfhthdtsgiaaatvlaaveagvdav
daamdalsgntsqpclgsivealsgserdpgldpawirrisfyweavrnqyaafesdlkg
pasevylhempggqftnlkeqarslgletrwhqvaqayadanqmfgdivkvtpsskvvgd
malmmvsqdltvadvvspdrevsfpesvvsmlkgdlgqppsgwpealqkkalkgekpytv
rpgsllkeadldaerkviekklerevsdfefasylmypkvftdfalasdtygpvsvlptp
ayfygladgeelfadiekgktlvivnqavsatdsqgmvtvffelngqprrikvpdra

  • Chain 'B':
    Sequence, based on SEQRES records:
    >4m6vB (B:)
mgsshhhhhhhhdydiptsenlyfqgllhqqvkrqdratklltyladvtvnghpeakdrp
kplenaarpvvpyangngvkdgtkqlldtlgpkkfgewmrnekrvlltdttmrdghqsll
atrmrtydiariagtyshalpnllslecwggatfdvsmrfltedpwerlaliregapnll
lqmllrgangvgytnypdnvvkyfvrqaakggidlfrvfdclnwvenmrvsmdaiaeenk
lceaaicytgdilnsarpkydlkyytnlavelekagahiiavkdmagllkpaaakvlfka
lreatglpihfhthdtsgiaaatvlaaveagvdavdaamdalsgntsqpclgsivealsg
serdpgldpawirrisfyweavrnqyaafesdlkgpasevylhempggqftnlkeqarsl
gletrwhqvaqayadanqmfgdivkvtpsskvvgdmalmmvsqdltvadvvspdrevsfp
esvvsmlkgdlgqppsgwpealqkkalkgekpytvrpgsllkeadldaerkviekklere
vsdfefasylmypkvftdfalasdtygpvsvlptpayfygladgeelfadiekgktlviv
nqavsatdsqgmvtvffelngqprrikvpdra

    Sequence, based on observed residues (ATOM records):
    >4m6vB (B:)
dratklltyladvtvnghpeakdrpkplenarpvvpyagvkdgtkqlldtlgpkkfgewm
rnekrvlltdttmrdghqsllatrmrtydiariagtyshalpnllslecwggatfdvsmr
fltedpwerlaliregapnlllqmllrgangvgytnypdnvvkyfvrqaakggidlfrvf
dclnwvenmrvsmdaiaeenklceaaicytgdilnsarpkydlkyytnlavelekagahi
iavkdmagllkpaaakvlfkalreatglpihfhthdtsgiaaatvlaaveagvdavdaam
dalsgntsqpclgsivealsgserdpgldpawirrisfyweavrnqyaafesdlkgpase
vylhempggqftnlkeqarslgletrwhqvaqayadanqmfgdivkvtpsskvvgdmalm
mvsqdltvadvvspdrevsfpesvvsmlkgdlgqppsgwpealqkkalkgekpytvrpgs
llkeadldaerkviekklerevsdfefasylmypkvftdfalasdtygpvsvlptpayfy
gladgeelfadiekgktlvivnqavsatdsqgmvtvffelngqprrikvpdra

  • Chain 'C':
    Sequence, based on SEQRES records:
    >4m6vC (C:)
mgsshhhhhhhhdydiptsenlyfqgllhqqvkrqdratklltyladvtvnghpeakdrp
kplenaarpvvpyangngvkdgtkqlldtlgpkkfgewmrnekrvlltdttmrdghqsll
atrmrtydiariagtyshalpnllslecwggatfdvsmrfltedpwerlaliregapnll
lqmllrgangvgytnypdnvvkyfvrqaakggidlfrvfdclnwvenmrvsmdaiaeenk
lceaaicytgdilnsarpkydlkyytnlavelekagahiiavkdmagllkpaaakvlfka
lreatglpihfhthdtsgiaaatvlaaveagvdavdaamdalsgntsqpclgsivealsg
serdpgldpawirrisfyweavrnqyaafesdlkgpasevylhempggqftnlkeqarsl
gletrwhqvaqayadanqmfgdivkvtpsskvvgdmalmmvsqdltvadvvspdrevsfp
esvvsmlkgdlgqppsgwpealqkkalkgekpytvrpgsllkeadldaerkviekklere
vsdfefasylmypkvftdfalasdtygpvsvlptpayfygladgeelfadiekgktlviv
nqavsatdsqgmvtvffelngqprrikvpdra

    Sequence, based on observed residues (ATOM records):
    >4m6vC (C:)
dratklltyladvtvnghpeakdrpkplenaarpvvpyagngvkdgtkqlldtlgpkkfg
ewmrnekrvlltdttmrdghqsllatrmrtydiariagtyshalpnllslecwggatfdv
smrfltedpwerlaliregapnlllqmllrgangvgytnypdnvvkyfvrqaakggidlf
rvfdclnwvenmrvsmdaiaeenklceaaicytgdilnsarpkydlkyytnlavelekag
ahiiavkdmagllkpaaakvlfkalreatglpihfhthdtsgiaaatvlaaveagvdavd
aamdalsgntsqpclgsivealsgserdpgldpawirrisfyweavrnqyaafesdlkgp
asevylhempggqftnlkeqarslgletrwhqvaqayadanqmfgdivkvtpsskvvgdm
almmvsqdltvadvvspdrevsfpesvvsmlkgdlgqppsgwpealqkkalkgekpytvr
pgsllkeadldaerkviekklerevsdfefasylmypkvftdfalasdtygpvsvlptpa
yfygladgeelfadiekgktlvivnqavsatdsqgmvtvffelngqprrikvpdra

  • Chain 'D':
    Sequence, based on SEQRES records:
    >4m6vD (D:)
mgsshhhhhhhhdydiptsenlyfqgllhqqvkrqdratklltyladvtvnghpeakdrp
kplenaarpvvpyangngvkdgtkqlldtlgpkkfgewmrnekrvlltdttmrdghqsll
atrmrtydiariagtyshalpnllslecwggatfdvsmrfltedpwerlaliregapnll
lqmllrgangvgytnypdnvvkyfvrqaakggidlfrvfdclnwvenmrvsmdaiaeenk
lceaaicytgdilnsarpkydlkyytnlavelekagahiiavkdmagllkpaaakvlfka
lreatglpihfhthdtsgiaaatvlaaveagvdavdaamdalsgntsqpclgsivealsg
serdpgldpawirrisfyweavrnqyaafesdlkgpasevylhempggqftnlkeqarsl
gletrwhqvaqayadanqmfgdivkvtpsskvvgdmalmmvsqdltvadvvspdrevsfp
esvvsmlkgdlgqppsgwpealqkkalkgekpytvrpgsllkeadldaerkviekklere
vsdfefasylmypkvftdfalasdtygpvsvlptpayfygladgeelfadiekgktlviv
nqavsatdsqgmvtvffelngqprrikvpdra

    Sequence, based on observed residues (ATOM records):
    >4m6vD (D:)
dratklltyladvtvnghpeakdrpkplenaarpvvpyagvkdgtkqlldtlgpkkfgew
mrnekrvlltdttmrdghqsllatrmrtydiariagtyshalpnllslecwggatfdvsm
rfltedpwerlaliregapnlllqmllrgangvgytnypdnvvkyfvrqaakggidlfrv
fdclnwvenmrvsmdaiaeenklceaaicytgdilnsarpkydlkyytnlavelekagah
iiavkdmagllkpaaakvlfkalreatglpihfhthdtsgiaaatvlaaveagvdavdaa
mdalsgntsqpclgsivealsgserdpgldpawirrisfyweavrnqyaafesdlkgpas
evylhempggqftnlkeqarslgletrwhqvaqayadanqmfgdivkvtpsskvvgdmal
mmvsqdltvadvvspdrevsfpesvvsmlkgdlgqppsgwpealqkkalkekpytvrpgs
llkeadldaerkviekklerevsdfefasylmypkvftdfalasdtygpvsvlptpayfy
gladgeelfadiekgktlvivnqavsatdsqgmvtvffelngqprrikvpdra