PDB entry 4m08

View 4m08 on RCSB PDB site
Description: Crystal Structure of Mutant Chlorite Dismutase from Candidatus Nitrospira defluvii W145V
Deposited on 2013-08-01, released 2014-01-15
The last revision was dated 2014-01-29, with a file datestamp of 2014-01-24.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.224
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: chlorite dismutase
    Species: Candidatus Nitrospira defluvii [TaxId:330214]
    Gene: cld, cld1, NIDE1387
    Database cross-references and differences (RAF-indexed):
    • Uniprot B3U4H7 (3-240)
      • engineered mutation (147)
  • Chain 'B':
    Compound: chlorite dismutase
    Species: Candidatus Nitrospira defluvii [TaxId:330214]
    Gene: cld, cld1, NIDE1387
    Database cross-references and differences (RAF-indexed):
    • Uniprot B3U4H7 (3-240)
      • engineered mutation (147)
  • Chain 'C':
    Compound: chlorite dismutase
    Species: Candidatus Nitrospira defluvii [TaxId:330214]
    Gene: cld, cld1, NIDE1387
    Database cross-references and differences (RAF-indexed):
    • Uniprot B3U4H7 (3-240)
      • engineered mutation (147)
  • Chain 'D':
    Compound: chlorite dismutase
    Species: Candidatus Nitrospira defluvii [TaxId:330214]
    Gene: cld, cld1, NIDE1387
    Database cross-references and differences (RAF-indexed):
    • Uniprot B3U4H7 (3-240)
      • engineered mutation (147)
  • Chain 'E':
    Compound: chlorite dismutase
    Species: Candidatus Nitrospira defluvii [TaxId:330214]
    Gene: cld, cld1, NIDE1387
    Database cross-references and differences (RAF-indexed):
    • Uniprot B3U4H7 (3-240)
      • engineered mutation (147)
  • Heterogens: HEM, SO4, IMD, EDO, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4m08A (A:)
    gamadreklltesgvygtfatfqmdhdwwdlpgesrvisvaevkglveqwsgkilvesyl
    lrglsdhadlmfrvhartlsdtqqflsafmgtrlgrhltsggllhgvskkptyvagfpes
    mktelqvngesgsrpyaivipikkdaevwaldqeartalmqehtqaalpylktvkrklyh
    stglddvdfityfeterledfhnlvralqqvkefrhnrrfghptllgtmspldeilekfa
    q
    

    Sequence, based on observed residues (ATOM records):
    >4m08A (A:)
    adreklltesgvygtfatfqmdhdwwdlpgesrvisvaevkglveqwsgkilvesyllrg
    lsdhadlmfrvhartlsdtqqflsafmgtrlgrhltsggllhgvskkptyvagfpesmkt
    elqvngesgsrpyaivipikkdaevwaldqeartalmqehtqaalpylktvkrklyhstg
    lddvdfityfeterledfhnlvralqqvkefrhnrrfghptllgtmspldeilekfaq
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >4m08B (B:)
    gamadreklltesgvygtfatfqmdhdwwdlpgesrvisvaevkglveqwsgkilvesyl
    lrglsdhadlmfrvhartlsdtqqflsafmgtrlgrhltsggllhgvskkptyvagfpes
    mktelqvngesgsrpyaivipikkdaevwaldqeartalmqehtqaalpylktvkrklyh
    stglddvdfityfeterledfhnlvralqqvkefrhnrrfghptllgtmspldeilekfa
    q
    

    Sequence, based on observed residues (ATOM records):
    >4m08B (B:)
    adreklltesgvygtfatfqmdhdwwdlpgesrvisvaevkglveqwsgkilvesyllrg
    lsdhadlmfrvhartlsdtqqflsafmgtrlgrhltsggllhgvskkptyvagfpesmkt
    elqvngesgsrpyaivipikkdaevwaldqeartalmqehtqaalpylktvkrklyhstg
    lddvdfityfeterledfhnlvralqqvkefrhnrrfghptllgtmspldeilekfaq
    

  • Chain 'C':
    Sequence, based on SEQRES records:
    >4m08C (C:)
    gamadreklltesgvygtfatfqmdhdwwdlpgesrvisvaevkglveqwsgkilvesyl
    lrglsdhadlmfrvhartlsdtqqflsafmgtrlgrhltsggllhgvskkptyvagfpes
    mktelqvngesgsrpyaivipikkdaevwaldqeartalmqehtqaalpylktvkrklyh
    stglddvdfityfeterledfhnlvralqqvkefrhnrrfghptllgtmspldeilekfa
    q
    

    Sequence, based on observed residues (ATOM records):
    >4m08C (C:)
    adreklltesgvygtfatfqmdhdwwdlpgesrvisvaevkglveqwsgkilvesyllrg
    lsdhadlmfrvhartlsdtqqflsafmgtrlgrhltsggllhgvskkptyvagfpesmkt
    elqvngesgsrpyaivipikkdaevwaldqeartalmqehtqaalpylktvkrklyhstg
    lddvdfityfeterledfhnlvralqqvkefrhnrrfghptllgtmspldeilekfaq
    

  • Chain 'D':
    Sequence, based on SEQRES records:
    >4m08D (D:)
    gamadreklltesgvygtfatfqmdhdwwdlpgesrvisvaevkglveqwsgkilvesyl
    lrglsdhadlmfrvhartlsdtqqflsafmgtrlgrhltsggllhgvskkptyvagfpes
    mktelqvngesgsrpyaivipikkdaevwaldqeartalmqehtqaalpylktvkrklyh
    stglddvdfityfeterledfhnlvralqqvkefrhnrrfghptllgtmspldeilekfa
    q
    

    Sequence, based on observed residues (ATOM records):
    >4m08D (D:)
    adreklltesgvygtfatfqmdhdwwdlpgesrvisvaevkglveqwsgkilvesyllrg
    lsdhadlmfrvhartlsdtqqflsafmgtrlgrhltsggllhgvskkptyvagfpesmkt
    elqvngesgsrpyaivipikkdaevwaldqeartalmqehtqaalpylktvkrklyhstg
    lddvdfityfeterledfhnlvralqqvkefrhnrrfghptllgtmspldeilekfaq
    

  • Chain 'E':
    Sequence, based on SEQRES records:
    >4m08E (E:)
    gamadreklltesgvygtfatfqmdhdwwdlpgesrvisvaevkglveqwsgkilvesyl
    lrglsdhadlmfrvhartlsdtqqflsafmgtrlgrhltsggllhgvskkptyvagfpes
    mktelqvngesgsrpyaivipikkdaevwaldqeartalmqehtqaalpylktvkrklyh
    stglddvdfityfeterledfhnlvralqqvkefrhnrrfghptllgtmspldeilekfa
    q
    

    Sequence, based on observed residues (ATOM records):
    >4m08E (E:)
    adreklltesgvygtfatfqmdhdwwdlpgesrvisvaevkglveqwsgkilvesyllrg
    lsdhadlmfrvhartlsdtqqflsafmgtrlgrhltsggllhgvskkptyvagfpesmkt
    elqvngesgsrpyaivipikkdaevwaldqeartalmqehtqaalpylktvkrklyhstg
    lddvdfityfeterledfhnlvralqqvkefrhnrrfghptllgtmspldeilekfaq