PDB entry 4lv7

View 4lv7 on RCSB PDB site
Description: crystal structure of inositol 1,3,4,5,6-pentakisphosphate 2-kinase e82c/s142c
Deposited on 2013-07-26, released 2013-11-06
The last revision was dated 2020-10-14, with a file datestamp of 2020-10-09.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: N/A
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: inositol-pentakisphosphate 2-kinase
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: At5g42810, IPK1, MJB21.19
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q93YN9
      • engineered mutation (115)
      • conflict (123)
      • engineered mutation (175)
      • conflict (218)
      • conflict (237)
      • conflict (257)
      • conflict (354)
      • conflict (358)
  • Chain 'B':
    Compound: inositol-pentakisphosphate 2-kinase
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: At5g42810, IPK1, MJB21.19
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q93YN9
      • engineered mutation (115)
      • conflict (123)
      • engineered mutation (175)
      • conflict (218)
      • conflict (237)
      • conflict (257)
      • conflict (354)
      • conflict (358)
  • Heterogens: IHP, ADP, MG, ZN

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4lv7A (A:)
    mgsshhhhhhssglvprgshmasmtggqqmgrilmemileekdasdwiyrgegganlvla
    yagssplfvgkviriqkarrndkaiknsngvvsvltsdeqhlwrennelisspnkcvleq
    ryvqnviipllgpkhvdagvrvsvskeflecvdkkvtkqrplwrvnaanvdtshdcalil
    ndhslfsqgitsggdcisveikpkcgflptsrfigkenilktsvsrfkmhqllkleyiei
    seeseydpldlfsgskervleaikalystpqnnfrvflngslilggsgestgrtspeigy
    afedalkgfiqsedghrtecflqlvsdavygsgvldrlleiqkldkldiegaihcyydii
    nqpcpickegrpleaelslhalpldeslkivkeyliaatakdcsimisfqsrnawdseps
    gdyvslkptnqtfdykvhfidlslkplkrmesyykldkkiisfynrkqkaentaeqigns
    kpshsdykddddk
    

    Sequence, based on observed residues (ATOM records):
    >4lv7A (A:)
    mileekdasdwiyrgegganlvlayagssplfvgkviriqkarrsvltsdeqhlwrenne
    lisspnkcvleqryvqnviipllgpkhvdagvrvsvskeflecvdkkvtkqrplwrvnaa
    nvdtshdcalilndhslfdcisveikpkcgflptsrfigkenilktsvsrfkmhqllkle
    yieiseeseydpldlfsgskervleaikalystpqnnfrvflngslilggsgestgrtsp
    eigyafedalkgfiqshrtecflqlvsdavygsgvldrlleiqkldkldiegaihcyydi
    inqpcpicslhalpldeslkivkeyliaatakdcsimisfqyvslkptnqtfdykvhfid
    lslkplkrmesyykldkkiisfynrkqkae
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >4lv7B (B:)
    mgsshhhhhhssglvprgshmasmtggqqmgrilmemileekdasdwiyrgegganlvla
    yagssplfvgkviriqkarrndkaiknsngvvsvltsdeqhlwrennelisspnkcvleq
    ryvqnviipllgpkhvdagvrvsvskeflecvdkkvtkqrplwrvnaanvdtshdcalil
    ndhslfsqgitsggdcisveikpkcgflptsrfigkenilktsvsrfkmhqllkleyiei
    seeseydpldlfsgskervleaikalystpqnnfrvflngslilggsgestgrtspeigy
    afedalkgfiqsedghrtecflqlvsdavygsgvldrlleiqkldkldiegaihcyydii
    nqpcpickegrpleaelslhalpldeslkivkeyliaatakdcsimisfqsrnawdseps
    gdyvslkptnqtfdykvhfidlslkplkrmesyykldkkiisfynrkqkaentaeqigns
    kpshsdykddddk
    

    Sequence, based on observed residues (ATOM records):
    >4lv7B (B:)
    mileekdasdwiyrgegganlvlayagssplfvgkviriqkasvltsdeqhlwrenneli
    sspnkcvleqryvqnviipllgpkhvdagvrvsvskeflecvdkkvtkqrplwrvnaanv
    dtshdcalilndhslfsqdcisveikpkcgflptsrfigkenilktsvsrfkmhqllkle
    yieiseeseydpldlfsgskervleaikalystpqnnfrvflngslilggsgestgrtsp
    eigyafedalkgfiqsghrtecflqlvsdavygsgvldrlleiqkldkldiegaihcyyd
    iinqpcpicslhalpldeslkivkeyliaatakdcsimisfqsrdyvslkptnqtfdykv
    hfidlslkplkrmesyykldkkiisfynrkqkae