PDB entry 4lun

View 4lun on RCSB PDB site
Description: structure of the n-terminal mif4g domain from s. cerevisiae upf2, a protein involved in the degradation of mrnas containing premature stop codons
Deposited on 2013-07-25, released 2014-07-30
The last revision was dated 2021-05-05, with a file datestamp of 2021-04-30.
Experiment type: XRAY
Resolution: 1.64 Å
R-factor: N/A
AEROSPACI score: 0.49 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'U':
    Compound: Nonsense-mediated mRNA decay protein 2
    Species: Saccharomyces cerevisiae [TaxId:559292]
    Gene: IFS1, NMD2, SUA1, UPF2, YHR077C
    Database cross-references and differences (RAF-indexed):
    • Uniprot P38798 (0-309)
      • expression tag (310-314)
  • Heterogens: CL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'U':
    Sequence, based on SEQRES records:
    >4lunU (U:)
mddgrkkelhdlntrawngeevfplkskkldssikrntgfikklkkgfvkgsessllkdl
seaslekylseiivtvtecllnvlnknddviaaveiisglhqrfngrftspllgaflqaf
enpsvdieserdelqritrvkgnlrvftelylvgvfrtlddieskdaipnflqkktgrkd
pllfsilreilnykfklgftttiatafikkfaplfrdddnswddliydsklkgalqslfk
nfidatfaratelhkkvnklqrehqkcqirtgklrdeyveeydkllpifirfktsaitlg
effkleipelhhhhhh

    Sequence, based on observed residues (ATOM records):
    >4lunU (U:)
mddgrkkelhdlntrawngeevfpkldssikrntgfikklkkgfvkgsessllkdlseas
lekylseiivtvtecllnvlnknddviaaveiisglhqrfngrftspllgaflqafenps
vdieserdelqritrvkgnlrvftelylvgvfrtlddieskdaipnflqkktgrkdpllf
silreilnykfklgftttiatafikkfaplfrdddnswddliydsklkgalqslfknfid
atfaratelhkkvnklqrehqkcqirtgklrdeyveeydkllpifirfktsaitlgeffk
leipelhhhhh