PDB entry 4lt5

View 4lt5 on RCSB PDB site
Description: structure of a naegleria tet-like dioxygenase in complex with 5- methylcytosine dna
Deposited on 2013-07-23, released 2013-12-18
The last revision was dated 2017-11-15, with a file datestamp of 2017-11-10.
Experiment type: XRAY
Resolution: 2.89 Å
R-factor: N/A
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Naegleria Tet-like dioxygenase
    Species: Naegleria gruberi [TaxId:5762]
    Gene: NAEGRDRAFT_55029
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: DNA
    Species: synthetic, synthetic
  • Chain 'C':
    Compound: DNA
    Species: synthetic, synthetic
  • Heterogens: MN, EDO, SO4, OGA, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4lt5A (A:)
mhhhhhhttfkqqtikeketkrkycikgttanltqthpngpvcvnrgeevantttlldsg
gginkksllqnllskckttfqqsftnanitlkdekwlknvrtayfvcdhdgsvelaylpn
vlpkelveeftekfesiqtgrkkdtgysgildnsmpfnyvtadlsqelgqylseivnpqi
nyyisklltcvssrtinylvslndsyyalnnclypstafnslkpsndghrirkphkdnld
itpsslfyfgnfqntegyleltdknckvfvqpgdvlffkgneykhvvanitsgwriglvy
fahkgsktkpyyedtqknslkihketk

    Sequence, based on observed residues (ATOM records):
    >4lt5A (A:)
inkksllqnllskckttfqqsftnanitlkdekwlknvrtayfvcdhdgsvelaylpnvl
pkelveeftekfesiqtgrkkdtgysgildnsmpfnyvtadlsqelgqylseivnpqiny
yisklltcvssrtinylvslndsyyalnnclypstafnslkpsndghrirkphkdnldit
psslfyfgnfqntegyleltdknckvfvqpgdvlffkgneykhvvanitsgwriglvyfa
hkgsktkpyyedtqknslkihketk

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.