PDB entry 4lsu
View 4lsu on RCSB PDB site
Description: Crystal structure of broadly and potently neutralizing antibody VRC-PG20 in complex with HIV-1 clade A/E 93TH057 gp120
Class: viral protein/immune system
Keywords: Neutralizing antibody VRC-PG20, viral protein-immune system complex
Deposited on
2013-07-23, released
2013-08-21
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-07-29, with a file datestamp of
2020-07-04.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.3
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'G':
Compound: hiv-1 clade a/e strain 93th057 gp120
Species: Human immunodeficiency virus 1 [TaxId:11676]
Gene: ENV
Database cross-references and differences (RAF-indexed):
- Chain 'H':
Compound: heavy chain of antibody vrc-pg20
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4lsuh_ - Chain 'L':
Compound: light chain of antibody vrc-pg20
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4lsul1, d4lsul2 - Heterogens: NAG, EPE, EDO, CL, HOH
PDB Chain Sequences:
- Chain 'G':
No sequence available.
- Chain 'H':
Sequence, based on SEQRES records: (download)
>4lsuH (H:)
evhlmqsgtemkkpgasvrvtcqtsgytfsdyfihwlrqvpgrgfewmgwmnpqwgqvny
artfqgrvtmtrdvyrevayldlrsltfadtavyfcarrmrsqdrewdfqhwgqgtriiv
ssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlq
ssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscdk
Sequence, based on observed residues (ATOM records): (download)
>4lsuH (H:)
evhlmqsgtemkkpgasvrvtcqtsgytfsdyfihwlrqvpgrgfewmgwmnpqwgqvny
artfqgrvtmtrdvyrevayldlrsltfadtavyfcarrmrsqdrewdfqhwgqgtriiv
ssastkgpsvfplapsssggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssg
lyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepksc
- Chain 'L':
Sequence, based on SEQRES records: (download)
>4lsuL (L:)
qsaltqppsvsgspgqsitlsctgastsvawyqqyadkaprlivfdgnkrpsdissrfsg
sqsggtasltisglqsedeayyhcnafeffgggtkltvlsqpkaapsvtlfppsseelqa
nkatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaassylsltpeqwks
hksyscqvthegstvektvaptec
Sequence, based on observed residues (ATOM records): (download)
>4lsuL (L:)
saltqppsvsgspgqsitlsctgastsvawyqqyadkaprlivfdgnkrpsdissrfsgs
qsggtasltisglqsedeayyhcnafeffgggtkltvlsqpkaapsvtlfppsseelqan
katlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaassylsltpeqwksh
ksyscqvthegstvektvaptec