PDB entry 4lsd

View 4lsd on RCSB PDB site
Description: Myokine structure
Deposited on 2013-07-22, released 2013-10-16
The last revision was dated 2014-02-12, with a file datestamp of 2014-02-07.
Experiment type: XRAY
Resolution: 2.28 Å
R-factor: 0.224
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Fibronectin type III domain-containing protein 5
    Species: Homo sapiens [TaxId:9606]
    Gene: FNDC5, FRCP2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8NAU1 (1-End)
      • initiating methionine (0)
  • Chain 'B':
    Compound: Fibronectin type III domain-containing protein 5
    Species: Homo sapiens [TaxId:9606]
    Gene: FNDC5, FRCP2
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Fibronectin type III domain-containing protein 5
    Species: Homo sapiens [TaxId:9606]
    Gene: FNDC5, FRCP2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8NAU1 (1-End)
      • initiating methionine (0)
  • Chain 'D':
    Compound: Fibronectin type III domain-containing protein 5
    Species: Homo sapiens [TaxId:9606]
    Gene: FNDC5, FRCP2
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Fibronectin type III domain-containing protein 5
    Species: Homo sapiens [TaxId:9606]
    Gene: FNDC5, FRCP2
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Fibronectin type III domain-containing protein 5
    Species: Homo sapiens [TaxId:9606]
    Gene: FNDC5, FRCP2
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: Fibronectin type III domain-containing protein 5
    Species: Homo sapiens [TaxId:9606]
    Gene: FNDC5, FRCP2
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: Fibronectin type III domain-containing protein 5
    Species: Homo sapiens [TaxId:9606]
    Gene: FNDC5, FRCP2
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4lsdA (A:)
mspsapvnvtvrhlkansavvswdvledevvigfaisqqkkdvrmlrfiqevntttrsca
lwdleedteyivhvqaisiqgqspasepvlfktpreaek

    Sequence, based on observed residues (ATOM records):
    >4lsdA (A:)
mspsapvnvtvrhlkansavvswdvledevvigfaisqqkkdvrmlrfiqevntttrsca
lwdleedteyivhvqaisiqgqspasepvlfktpreae

  • Chain 'B':
    Sequence, based on SEQRES records:
    >4lsdB (B:)
mspsapvnvtvrhlkansavvswdvledevvigfaisqqkkdvrmlrfiqevntttrsca
lwdleedteyivhvqaisiqgqspasepvlfktpreaek

    Sequence, based on observed residues (ATOM records):
    >4lsdB (B:)
spsapvnvtvrhlkansavvswdvledevvigfaisqqkkdvrmlrfiqevntttrscal
wdleedteyivhvqaisiqgqspasepvlfktpr

  • Chain 'C':
    Sequence, based on SEQRES records:
    >4lsdC (C:)
mspsapvnvtvrhlkansavvswdvledevvigfaisqqkkdvrmlrfiqevntttrsca
lwdleedteyivhvqaisiqgqspasepvlfktpreaek

    Sequence, based on observed residues (ATOM records):
    >4lsdC (C:)
mspsapvnvtvrhlkansavvswdvledevvigfaisqqkkdvrmlrfiqevntttrsca
lwdleedteyivhvqaisiqgqspasepvlfktpr

  • Chain 'D':
    Sequence, based on SEQRES records:
    >4lsdD (D:)
mspsapvnvtvrhlkansavvswdvledevvigfaisqqkkdvrmlrfiqevntttrsca
lwdleedteyivhvqaisiqgqspasepvlfktpreaek

    Sequence, based on observed residues (ATOM records):
    >4lsdD (D:)
spsapvnvtvrhlkansavvswdvledevvigfaisqqkkdvrmlrfiqevntttrscal
wdleedteyivhvqaisiqgqspasepvlfktpr

  • Chain 'E':
    Sequence, based on SEQRES records:
    >4lsdE (E:)
mspsapvnvtvrhlkansavvswdvledevvigfaisqqkkdvrmlrfiqevntttrsca
lwdleedteyivhvqaisiqgqspasepvlfktpreaek

    Sequence, based on observed residues (ATOM records):
    >4lsdE (E:)
spsapvnvtvrhlkansavvswdvledevvigfaisqqkkdvrmlrfiqevntttrscal
wdleedteyivhvqaisiqgqspasepvlfktpr

  • Chain 'F':
    Sequence, based on SEQRES records:
    >4lsdF (F:)
mspsapvnvtvrhlkansavvswdvledevvigfaisqqkkdvrmlrfiqevntttrsca
lwdleedteyivhvqaisiqgqspasepvlfktpreaek

    Sequence, based on observed residues (ATOM records):
    >4lsdF (F:)
spsapvnvtvrhlkansavvswdvledevvigfaisqqkkdvrmlrfiqevntttrscal
wdleedteyivhvqaisiqgqspasepvlfktpreaek

  • Chain 'G':
    Sequence, based on SEQRES records:
    >4lsdG (G:)
mspsapvnvtvrhlkansavvswdvledevvigfaisqqkkdvrmlrfiqevntttrsca
lwdleedteyivhvqaisiqgqspasepvlfktpreaek

    Sequence, based on observed residues (ATOM records):
    >4lsdG (G:)
spsapvnvtvrhlkansavvswdvledevvigfaisqqkkdvrmlrfiqevntttrscal
wdleedteyivhvqaisiqgqspasepvlfktpr

  • Chain 'H':
    Sequence, based on SEQRES records:
    >4lsdH (H:)
mspsapvnvtvrhlkansavvswdvledevvigfaisqqkkdvrmlrfiqevntttrsca
lwdleedteyivhvqaisiqgqspasepvlfktpreaek

    Sequence, based on observed residues (ATOM records):
    >4lsdH (H:)
spsapvnvtvrhlkansavvswdvledevvigfaisqqkkdvrmlrfiqevntttrscal
wdleedteyivhvqaisiqgqspasepvlfktpr