PDB entry 4lr9

View 4lr9 on RCSB PDB site
Description: phosphopentomutase s154a variant soaked with 2,3-dideoxyribose 5- phosphate
Deposited on 2013-07-19, released 2013-07-31
The last revision was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Phosphopentomutase
    Species: Bacillus cereus [TaxId:1396]
    Gene: BC_4087, deoB
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q818Z9 (23-End)
      • engineered mutation (175)
  • Chain 'B':
    Compound: Phosphopentomutase
    Species: Bacillus cereus [TaxId:1396]
    Gene: BC_4087, deoB
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q818Z9 (23-End)
      • engineered mutation (175)
  • Chain 'C':
    Compound: Phosphopentomutase
    Species: Bacillus cereus [TaxId:1396]
    Gene: BC_4087, deoB
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q818Z9
      • engineered mutation (175)
  • Heterogens: MN, GOL, 1X4, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4lr9A (A:)
mgsshhhhhhssglvprgshmasnkykriflvvmdsvgigeapdaeqfgdlgsdtighia
ehmnglqmpnmvklglgniremkgiskvekplgyytkmqekstgkdtmtghweimglyid
tpfqvfpegfpkelldeleektgrkiignkpasgteildelgqeqmetgslivytaadsv
lqiaaheevvpldelykickiareltldekymvgrviarpfvgepgnftrtpnrhdyalk
pfgrtvmnelkdsdydviaigkisdiydgegvteslrtksnmdgmdklvdtlnmdftgls
flnlvdfdalfghrrdpqgygealqeydarlpevfaklkeddlllitadhgndpihpgtd
htreyvpllayspsmkeggqelplrqtfadigatvaenfgvkmpeygtsflnelkk

    Sequence, based on observed residues (ATOM records):
    >4lr9A (A:)
nkykriflvvmdsvgigeapdaeqfgdlgsdtighiaehmnglqmpnmvklglgniremk
giskvekplgyytkmqekstgkdtmtghweimglyidtpfqvfpegfpkelldeleektg
rkiignkpasgteildelgqeqmetgslivytaadsvlqiaaheevvpldelykickiar
eltldekymvgrviarpfvgepgnftrtpnrhdyalkpfgrtvmnelkdsdydviaigki
sdiydgegvteslrtksnmdgmdklvdtlnmdftglsflnlvdfdalfghrrdpqgygea
lqeydarlpevfaklkeddlllitadhgndpihpgtdhtreyvpllayspsmkeggqelp
lrqtfadigatvaenfgvkmpeygtsflnel

  • Chain 'B':
    Sequence, based on SEQRES records:
    >4lr9B (B:)
mgsshhhhhhssglvprgshmasnkykriflvvmdsvgigeapdaeqfgdlgsdtighia
ehmnglqmpnmvklglgniremkgiskvekplgyytkmqekstgkdtmtghweimglyid
tpfqvfpegfpkelldeleektgrkiignkpasgteildelgqeqmetgslivytaadsv
lqiaaheevvpldelykickiareltldekymvgrviarpfvgepgnftrtpnrhdyalk
pfgrtvmnelkdsdydviaigkisdiydgegvteslrtksnmdgmdklvdtlnmdftgls
flnlvdfdalfghrrdpqgygealqeydarlpevfaklkeddlllitadhgndpihpgtd
htreyvpllayspsmkeggqelplrqtfadigatvaenfgvkmpeygtsflnelkk

    Sequence, based on observed residues (ATOM records):
    >4lr9B (B:)
nkykriflvvmdsvgigeapdaeqfgdlgsdtighiaehmnglqmpnmvklglgniremk
giskvekplgyytkmqekstgkdtmtghweimglyidtpfqvfpegfpkelldeleektg
rkiignkpasgteildelgqeqmetgslivytaadsvlqiaaheevvpldelykickiar
eltldekymvgrviarpfvgepgnftrtpnrhdyalkpfgrtvmnelkdsdydviaigki
sdiydgegvteslrtksnmdgmdklvdtlnmdftglsflnlvdfdalfghrrdpqgygea
lqeydarlpevfaklkeddlllitadhgndpihpgtdhtreyvpllayspsmkeggqelp
lrqtfadigatvaenfgvkmpeygtsflnel

  • Chain 'C':
    Sequence, based on SEQRES records:
    >4lr9C (C:)
mgsshhhhhhssglvprgshmasnkykriflvvmdsvgigeapdaeqfgdlgsdtighia
ehmnglqmpnmvklglgniremkgiskvekplgyytkmqekstgkdtmtghweimglyid
tpfqvfpegfpkelldeleektgrkiignkpasgteildelgqeqmetgslivytaadsv
lqiaaheevvpldelykickiareltldekymvgrviarpfvgepgnftrtpnrhdyalk
pfgrtvmnelkdsdydviaigkisdiydgegvteslrtksnmdgmdklvdtlnmdftgls
flnlvdfdalfghrrdpqgygealqeydarlpevfaklkeddlllitadhgndpihpgtd
htreyvpllayspsmkeggqelplrqtfadigatvaenfgvkmpeygtsflnelkk

    Sequence, based on observed residues (ATOM records):
    >4lr9C (C:)
kykriflvvmdsvgigeapdaeqfgdlgsdtighiaehmnglqmpnmvklglgniremkg
iskvekplgyytkmqekstgkdtmtghweimglyidtpfqvfpegfpkelldeleektgr
kiignkpasgteildelgqeqmetgslivytaadsvlqiaaheevvpldelykickiare
ltldekymvgrviarpfvgepgnftrtpnrhdyalkpfgrtvmnelkdsdydviaigkis
diydgegvteslrtksnmdgmdklvdtlnmdftglsflnlvdfdalfghrrdpqgygeal
qeydarlpevfaklkeddlllitadhgndpihpgtdhtreyvpllayspsmkeggqelpl
rqtfadigatvaenfgvkmpeygtsflnel