PDB entry 4lq9

View 4lq9 on RCSB PDB site
Description: Crystal structure of human norovirus RNA-dependent RNA-polymerase in complex with NAF2
Deposited on 2013-07-17, released 2014-02-12
The last revision was dated 2014-02-12, with a file datestamp of 2014-02-07.
Experiment type: XRAY
Resolution: 2.04 Å
R-factor: 0.173
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: RNA-dependent RNA-polymerase
    Species: Norovirus [TaxId:142786]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q2N379
      • conflict (153)
  • Heterogens: 21D, MG, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4lq9A (A:)
mggdskgtycgapilgpgsapklstktkfwrssttplppgtyepaylggkdprvkggpsl
qqvmrdqlkpfteprgkppkpsvleaakktiinvleqtidppekwsftqacasldkttss
ghphhmrkndcwngesftgkladqaskanlmfeggknmtpvytgalkdelvktdkiygki
kkrllwgsdlatmircarafgglmdelkahcvtlpirvgmnmnedgpiiferhsrykyhy
dadysrwdstqqravlaaaleimvkfssephlaqvvaedllspsvvdvgdfkisineglp
sgvpctsqwnsiahwlltlcalsevtnlspdiiqanslfsfygddeivstdikldpeklt
aklkeyglkptrpdktegplvisedlngltflrrtvtrdpagwfgkleqssilrqmywtr
gpnhedpsetmiphsqrpiqlmsllgeaalhgpafyskisklviaelkeggmdfyvprqe
pmfrwmrfsdlstwegdrnlapsfvnedgvevdklaaalehhhhhh

    Sequence, based on observed residues (ATOM records):
    >4lq9A (A:)
gtycgapilgpgsapklstktkfwrssttplppgtyepaylggkdprvkggpslqqvmrd
qlkpfteprgkppkpsvleaakktiinvleqtidppekwsftqacasldkttssghphhm
rkndcwngesftgkladqaskanlmfeggknmtpvytgalkdelvktdkiygkikkrllw
gsdlatmircarafgglmdelkahcvtlpirvgmnmnedgpiiferhsrykyhydadysr
wdstqqravlaaaleimvkfssephlaqvvaedllspsvvdvgdfkisineglpsgvpct
sqwnsiahwlltlcalsevtnlspdiiqanslfsfygddeivstdikldpekltaklkey
glkptrpdktegplvisedlngltflrrtvtrdpagwfgkleqssilrqmywtrgpnhed
psetmiphsqrpiqlmsllgeaalhgpafyskisklviaelkeggmdfyvprqepmfrwm
rfsdlstwegdrnlapsfvne