PDB entry 4lq3

View 4lq3 on RCSB PDB site
Description: Crystal structure of human norovirus RNA-dependent RNA-polymerase bound to the inhibitor PPNDS
Deposited on 2013-07-17, released 2014-02-12
The last revision was dated 2014-11-05, with a file datestamp of 2014-10-31.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.223
AEROSPACI score: 0.22 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: RNA-dependent RNA-polymerase
    Species: Norovirus [TaxId:142786]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q2N379 (Start-510)
      • conflict (153)
  • Chain 'R':
    Compound: 5'-r(p*gp*g)-3'
  • Heterogens: 20V, MG, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4lq3A (A:)
    mggdskgtycgapilgpgsapklstktkfwrssttplppgtyepaylggkdprvkggpsl
    qqvmrdqlkpfteprgkppkpsvleaakktiinvleqtidppekwsftqacasldkttss
    ghphhmrkndcwngesftgkladqaskanlmfeggknmtpvytgalkdelvktdkiygki
    kkrllwgsdlatmircarafgglmdelkahcvtlpirvgmnmnedgpiiferhsrykyhy
    dadysrwdstqqravlaaaleimvkfssephlaqvvaedllspsvvdvgdfkisineglp
    sgvpctsqwnsiahwlltlcalsevtnlspdiiqanslfsfygddeivstdikldpeklt
    aklkeyglkptrpdktegplvisedlngltflrrtvtrdpagwfgkleqssilrqmywtr
    gpnhedpsetmiphsqrpiqlmsllgeaalhgpafyskisklviaelkeggmdfyvprqe
    pmfrwmrfsdlstwegdrnlapsfvnedgvevdklaaalehhhhhh
    

    Sequence, based on observed residues (ATOM records):
    >4lq3A (A:)
    gtycgapilgpgsapklstktkfwrssttplppgtyepaylggkdprvkggpslqqvmrd
    qlkpfteprgkppkpsvleaakktiinvleqtidppekwsftqacasldkttssghphhm
    rkndcwngesftgkladqaskanlmfeggknmtpvytgalkdelvktdkiygkikkrllw
    gsdlatmircarafgglmdelkahcvtlpirvgmnmnedgpiiferhsrykyhydadysr
    wdstqqravlaaaleimvkfssephlaqvvaedllspsvvdvgdfkisinepsgvpctsq
    wnsiahwlltlcalsevtnlspdiiqanslfsfygddeivstdikldpekltaklkeygl
    kptrpdgplvisedlngltflrrtvtrdpagwfgkleqssilrqmywtrgpnhedpsetm
    sqrpiqlmsllgeaalhgpafyskisklviaelkegmdyvprqepmfrwmrfsdlstweg
    drnlapsfvnedgve
    

  • Chain 'R':
    No sequence available.