PDB entry 4lox

View 4lox on RCSB PDB site
Description: crystal structure of the i-smami laglidadg homing endonuclease bound to cleaved dna
Deposited on 2013-07-14, released 2014-09-24
The last revision was dated 2014-09-24, with a file datestamp of 2014-09-19.
Experiment type: XRAY
Resolution: 1.98 Å
R-factor: 0.191
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: LAGLIDADG homing endonuclease I-SmaMI
    Species: Sordaria macrospora [TaxId:771870]
    Gene: Cytochrome c oxidase subunit 1, mitochondrial Introne encoded, SMAC_12671
    Database cross-references and differences (RAF-indexed):
    • Uniprot F7WD42 (Start-301)
      • cloning artifact (5)
  • Chain 'B':
    Compound: DNA (5'-d(*cp*gp*tp*ap*cp*ap*cp*cp*tp*gp*ap*tp*ap*a)-3')
  • Chain 'C':
    Compound: DNA (5'-d(p*tp*gp*gp*ap*gp*gp*ap*tp*ap*cp*c)-3')
  • Chain 'D':
    Compound: DNA (5'-d(*gp*gp*tp*ap*tp*cp*cp*tp*cp*cp*ap*tp*tp*ap*t)-3')
  • Chain 'E':
    Compound: DNA (5'-d(p*cp*ap*gp*gp*tp*gp*tp*ap*cp*g)-3')
  • Heterogens: MG, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4loxA (A:)
skgengklnpwavvgfidaegsfmvrvrknskyktgwlvvaifsvtvdkkdlflleslkt
ffgglgsikksgnstfsyriesseqltkiilpffdkysliteklgdyllfkkvlelmgtk
ehltqrglekivslkasinkglseelqaafpqcvptprpeinnklipdpfwlagfvsgdg
sfksilkksesikvgfqsilvfqitqhardvklmeslisylgcgfiekdsrgpwlyytvt
nfsdiqgkiipffhqykiigskygdymdwckialimqnknhltpeglneiralkggmnkg
rl

    Sequence, based on observed residues (ATOM records):
    >4loxA (A:)
gengklnpwavvgfidaegsfmvrvrknskyktgwlvvaifsvtvdkkdlflleslktff
gglgsikksgnstfsyriesseqltkiilpffdkysliteklgdyllfkkvlelmgtkeh
ltqrglekivslkasinkglseelqaafpqcvptprpeinnklipdpfwlagfvsgdgsf
ksilkksesikvgfqsilvfqitqhardvklmeslisylgcgfiekdsrgpwlyytvtnf
sdiqgkiipffhqykiigskygdymdwckialimqnknhltpeglneiralkggmnkgrl

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.

  • Chain 'E':
    No sequence available.