PDB entry 4loc

View 4loc on RCSB PDB site
Description: structure of the carboxyl transferase domain from rhizobium etli pyruvate carboxylase with oxamate and biotin
Deposited on 2013-07-12, released 2014-09-10
The last revision was dated 2018-01-31, with a file datestamp of 2018-01-26.
Experiment type: XRAY
Resolution: 2.26 Å
R-factor: N/A
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: pyruvate carboxylase
    Species: Rhizobium etli [TaxId:347834]
    Gene: pyc, RHE_CH04002
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: pyruvate carboxylase
    Species: Rhizobium etli [TaxId:347834]
    Gene: pyc, RHE_CH04002
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: pyruvate carboxylase
    Species: Rhizobium etli [TaxId:347834]
    Gene: pyc, RHE_CH04002
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: pyruvate carboxylase
    Species: Rhizobium etli [TaxId:347834]
    Gene: pyc, RHE_CH04002
    Database cross-references and differences (RAF-indexed):
  • Heterogens: ZN, MG, CL, BTN, OXM, GOL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4locA (A:)
mgsshhhhhhhhdydiptsenlyfqgllhqqvkrqdratklltyladvtvnghpeakdrp
kplenaarpvvpyangngvkdgtkqlldtlgpkkfgewmrnekrvlltdttmrdghqsll
atrmrtydiariagtyshalpnllslecwggatfdvsmrfltedpwerlaliregapnll
lqmllrgangvgytnypdnvvkyfvrqaakggidlfrvfdclnwvenmrvsmdaiaeenk
lceaaicytgdilnsarpkydlkyytnlavelekagahiiavkdmagllkpaaakvlfka
lreatglpihfhthdtsgiaaatvlaaveagvdavdaamdalsgntsqpclgsivealsg
serdpgldpawirrisfyweavrnqyaafesdlkgpasevylhempggqftnlkeqarsl
gletrwhqvaqayadanqmfgdivkvtpsskvvgdmalmmvsqdltvadvvspdrevsfp
esvvsmlkgdlgqppsgwpealqkkalkgekpytvrpgsllkeadldaerkviekklere
vsdfefasylmypkvftdfalasdtygpvsvlptpayfygladgeelfadiekgktlviv
nqavsatdsqgmvtvffelngqprrikvpdra

    Sequence, based on observed residues (ATOM records):
    >4locA (A:)
dratklltyladvtvnghpeakdrpkplenaarpvvpyangngvkdgtkqlldtlgpkkf
gewmrnekrvlltdttmrdghqsllatrmrtydiariagtyshalpnllslecwggatfd
vsmrfltedpwerlaliregapnlllqmllrgangvgytnypdnvvkyfvrqaakggidl
frvfdclnwvenmrvsmdaiaeenklceaaicytgdilnsarpkydlkyytnlaveleka
gahiiavkdmagllkpaaakvlfkalreatglpihfhthdtsgiaaatvlaaveagvdav
daamdalsgntsqpclgsivealsgserdpgldpawirrisfyweavrnqyaafesdlkg
pasevylhempggqftnlkeqarslgletrwhqvaqayadanqmfgdivkvtpsskvvgd
malmmvsqdltvadvvspdrevsfpesvvsmlkgdlgqppsgwpealqkkalkgekpytv
rpgsllkeadldaerkviekklerevsdfefasylmypkvftdfalasdtygpvsvlptp
ayfygladgeelfadiektlvivnqavsatdsqgmvtvffelngqprrikvpdra

  • Chain 'B':
    Sequence, based on SEQRES records:
    >4locB (B:)
mgsshhhhhhhhdydiptsenlyfqgllhqqvkrqdratklltyladvtvnghpeakdrp
kplenaarpvvpyangngvkdgtkqlldtlgpkkfgewmrnekrvlltdttmrdghqsll
atrmrtydiariagtyshalpnllslecwggatfdvsmrfltedpwerlaliregapnll
lqmllrgangvgytnypdnvvkyfvrqaakggidlfrvfdclnwvenmrvsmdaiaeenk
lceaaicytgdilnsarpkydlkyytnlavelekagahiiavkdmagllkpaaakvlfka
lreatglpihfhthdtsgiaaatvlaaveagvdavdaamdalsgntsqpclgsivealsg
serdpgldpawirrisfyweavrnqyaafesdlkgpasevylhempggqftnlkeqarsl
gletrwhqvaqayadanqmfgdivkvtpsskvvgdmalmmvsqdltvadvvspdrevsfp
esvvsmlkgdlgqppsgwpealqkkalkgekpytvrpgsllkeadldaerkviekklere
vsdfefasylmypkvftdfalasdtygpvsvlptpayfygladgeelfadiekgktlviv
nqavsatdsqgmvtvffelngqprrikvpdra

    Sequence, based on observed residues (ATOM records):
    >4locB (B:)
dratklltyladvtvnghpeakdrpkplenrpvvpyangngvkdgtkqlldtlgpkkfge
wmrnekrvlltdttmrdghqsllatrmrtydiariagtyshalpnllslecwggatfdvs
mrfltedpwerlaliregapnlllqmllrgangvgytnypdnvvkyfvrqaakggidlfr
vfdclnwvenmrvsmdaiaeenklceaaicytgdilnsarpkydlkyytnlavelekaga
hiiavkdmagllkpaaakvlfkalreatglpihfhthdtsgiaaatvlaaveagvdavda
amdalsgntsqpclgsivealsgserdpgldpawirrisfyweavrnqyaafesdlkgpa
sevylhempggqftnlkeqarslgletrwhqvaqayadanqmfgdivkvtpsskvvgdma
lmmvsqdltvadvvspdrevsfpesvvsmlkgdlgqppsgwpealqkkalkgekpytvrp
gsllkeadldaerkviekklerevsdfefasylmypkvftdfalasdtygpvsvlptpay
fygladgeelfadiektlvivnqavsatdsqgmvtvffelngqprrikvpdra

  • Chain 'C':
    Sequence, based on SEQRES records:
    >4locC (C:)
mgsshhhhhhhhdydiptsenlyfqgllhqqvkrqdratklltyladvtvnghpeakdrp
kplenaarpvvpyangngvkdgtkqlldtlgpkkfgewmrnekrvlltdttmrdghqsll
atrmrtydiariagtyshalpnllslecwggatfdvsmrfltedpwerlaliregapnll
lqmllrgangvgytnypdnvvkyfvrqaakggidlfrvfdclnwvenmrvsmdaiaeenk
lceaaicytgdilnsarpkydlkyytnlavelekagahiiavkdmagllkpaaakvlfka
lreatglpihfhthdtsgiaaatvlaaveagvdavdaamdalsgntsqpclgsivealsg
serdpgldpawirrisfyweavrnqyaafesdlkgpasevylhempggqftnlkeqarsl
gletrwhqvaqayadanqmfgdivkvtpsskvvgdmalmmvsqdltvadvvspdrevsfp
esvvsmlkgdlgqppsgwpealqkkalkgekpytvrpgsllkeadldaerkviekklere
vsdfefasylmypkvftdfalasdtygpvsvlptpayfygladgeelfadiekgktlviv
nqavsatdsqgmvtvffelngqprrikvpdra

    Sequence, based on observed residues (ATOM records):
    >4locC (C:)
dratklltyladvtvnghpeakdrpkplenaarpvvpygngvkdgtkqlldtlgpkkfge
wmrnekrvlltdttmrdghqsllatrmrtydiariagtyshalpnllslecwggatfdvs
mrfltedpwerlaliregapnlllqmllrgangvgytnypdnvvkyfvrqaakggidlfr
vfdclnwvenmrvsmdaiaeenklceaaicytgdilnsarpkydlkyytnlavelekaga
hiiavkdmagllkpaaakvlfkalreatglpihfhthdtsgiaaatvlaaveagvdavda
amdalsgntsqpclgsivealsgserdpgldpawirrisfyweavrnqyaafesdlkgpa
sevylhempggqftnlkeqarslgletrwhqvaqayadanqmfgdivkvtpsskvvgdma
lmmvsqdltvadvvspdrevsfpesvvsmlkgdlgqppsgwpealqkkalkgekpytvrp
gsllkeadldaerkviekklerevsdfefasylmypkvftdfalasdtygpvsvlptpay
fygladgeelfadiekgktlvivnqavsatdsqgmvtvffelngqprrikvpdra

  • Chain 'D':
    Sequence, based on SEQRES records:
    >4locD (D:)
mgsshhhhhhhhdydiptsenlyfqgllhqqvkrqdratklltyladvtvnghpeakdrp
kplenaarpvvpyangngvkdgtkqlldtlgpkkfgewmrnekrvlltdttmrdghqsll
atrmrtydiariagtyshalpnllslecwggatfdvsmrfltedpwerlaliregapnll
lqmllrgangvgytnypdnvvkyfvrqaakggidlfrvfdclnwvenmrvsmdaiaeenk
lceaaicytgdilnsarpkydlkyytnlavelekagahiiavkdmagllkpaaakvlfka
lreatglpihfhthdtsgiaaatvlaaveagvdavdaamdalsgntsqpclgsivealsg
serdpgldpawirrisfyweavrnqyaafesdlkgpasevylhempggqftnlkeqarsl
gletrwhqvaqayadanqmfgdivkvtpsskvvgdmalmmvsqdltvadvvspdrevsfp
esvvsmlkgdlgqppsgwpealqkkalkgekpytvrpgsllkeadldaerkviekklere
vsdfefasylmypkvftdfalasdtygpvsvlptpayfygladgeelfadiekgktlviv
nqavsatdsqgmvtvffelngqprrikvpdra

    Sequence, based on observed residues (ATOM records):
    >4locD (D:)
dratklltyladvtvnghpeakdrpkplenaarpvvpyangngvkdgtkqlldtlgpkkf
gewmrnekrvlltdttmrdghqsllatrmrtydiariagtyshalpnllslecwggatfd
vsmrfltedpwerlaliregapnlllqmllrgangvgytnypdnvvkyfvrqaakggidl
frvfdclnwvenmrvsmdaiaeenklceaaicytgdilnsarpkydlkyytnlaveleka
gahiiavkdmagllkpaaakvlfkalreatglpihfhthdtsgiaaatvlaaveagvdav
daamdalsgntsqpclgsivealsgserdpgldpawirrisfyweavrnqyaafesdlkg
pasevylhempggqftnlkeqarslgletrwhqvaqayadanqmfgdivkvtpsskvvgd
malmmvsqdltvadvvsprevsfpesvvsmlkgdlgqppsgwpealqkkalkgekpytvr
pgsllkeadldaerkviekklerevsdfefasylmypkvftdfalasdtygpvsvlptpa
yfygladgeelfadiekgktlvivnqavsatdsqgmvtvffelngqprrikvpdra