PDB entry 4ln4

View 4ln4 on RCSB PDB site
Description: The crystal structure of hemagglutinin form a h7n9 influenza virus (a/shanghai/1/2013) in complex with lstb
Class: viral protein
Keywords: receptor specificity, viral protein
Deposited on 2013-07-11, released 2013-10-02
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: N/A
AEROSPACI score: 0.17 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Hemagglutinin
    Species: Influenza A virus [TaxId:1332244]
    Database cross-references and differences (RAF-indexed):
    • PDB 4LN4
    Domains in SCOPe 2.08: d4ln4a_
  • Chain 'B':
    Compound: Hemagglutinin
    Species: Influenza A virus [TaxId:1332244]
    Database cross-references and differences (RAF-indexed):
    • PDB 4LN4
    Domains in SCOPe 2.08: d4ln4b_
  • Chain 'C':
    Compound: Hemagglutinin
    Species: Influenza A virus [TaxId:1332244]
    Database cross-references and differences (RAF-indexed):
    • PDB 4LN4
    Domains in SCOPe 2.08: d4ln4c_
  • Chain 'D':
    Compound: Hemagglutinin
    Species: Influenza A virus [TaxId:1332244]
    Database cross-references and differences (RAF-indexed):
    • PDB 4LN4
    Domains in SCOPe 2.08: d4ln4d_
  • Chain 'E':
    Compound: Hemagglutinin
    Species: Influenza A virus [TaxId:1332244]
    Database cross-references and differences (RAF-indexed):
    • PDB 4LN4
    Domains in SCOPe 2.08: d4ln4e_
  • Chain 'F':
    Compound: Hemagglutinin
    Species: Influenza A virus [TaxId:1332244]
    Database cross-references and differences (RAF-indexed):
    • PDB 4LN4
    Domains in SCOPe 2.08: d4ln4f_
  • Chain 'G':
    Compound: Hemagglutinin
    Species: Influenza A virus [TaxId:1332244]
    Database cross-references and differences (RAF-indexed):
    • PDB 4LN4
    Domains in SCOPe 2.08: d4ln4g_
  • Chain 'H':
    Compound: Hemagglutinin
    Species: Influenza A virus [TaxId:1332244]
    Database cross-references and differences (RAF-indexed):
    • PDB 4LN4
    Domains in SCOPe 2.08: d4ln4h_
  • Chain 'I':
    Compound: Hemagglutinin
    Species: Influenza A virus [TaxId:1332244]
    Database cross-references and differences (RAF-indexed):
    • PDB 4LN4
    Domains in SCOPe 2.08: d4ln4i_
  • Chain 'J':
    Compound: Hemagglutinin
    Species: Influenza A virus [TaxId:1332244]
    Database cross-references and differences (RAF-indexed):
    • PDB 4LN4
    Domains in SCOPe 2.08: d4ln4j_
  • Chain 'K':
    Compound: Hemagglutinin
    Species: Influenza A virus [TaxId:1332244]
    Database cross-references and differences (RAF-indexed):
    • PDB 4LN4
    Domains in SCOPe 2.08: d4ln4k_
  • Chain 'L':
    Compound: Hemagglutinin
    Species: Influenza A virus [TaxId:1332244]
    Database cross-references and differences (RAF-indexed):
    • PDB 4LN4
    Domains in SCOPe 2.08: d4ln4l_
  • Heterogens: NAG

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4ln4A (A:)
adpgdkiclghhavsngtkvntltergvevvnatetvertnipricskgkrtvdlgqcgl
lgtitgppqcdqflefsadliierregsdvcypgkfvneealrqilresggidkeamgft
ysgirtngatsscrrsgssfyaemkwllsntdnaafpqmtksykntrknpalivwgihhs
gstaeqtklygsgnklvtvgssnyqqsfvpspgartqvngqsgridfhwlmlnpndtvtf
sfngafiapdrasflrgksmgiqsgvqvdadcegdcyysggtiisnlpfqnidsravgkc
pryvkqrslllatgmknvpeipkgr

    Sequence, based on observed residues (ATOM records): (download) 
    >4ln4A (A:)
gdkiclghhavsngtkvntltergvevvnatetvertnipricskgkrtvdlgqcgllgt
itgppqcdqflefsadliierregsdvcypgkfvneealrqilresggidkeamgftysg
irtngatsscrrsgssfyaemkwllsntdnaafpqmtksykntrknpalivwgihhsgst
aeqtklygsgnklvtvgssnyqqsfvpspgartqvngqsgridfhwlmlnpndtvtfsfn
gafiapdrasflrgksmgiqsgvqvdadcegdcyysggtiisnlpfqnidsravgkcpry
vkqrslllatgmknvp

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4ln4B (B:)
glfgaiagfiengweglidgwygfrhqnaqgegtaadykstqsaidqitgklnrliektn
qqfelidneftevekqignvinwtrdsitevwsynaellvamenqhtidladsemdklye
rvkrqlrenaeedgtgcfeifhkcdddcmasirnntydhskyreeamqnriqidsgrlvp
r

    Sequence, based on observed residues (ATOM records): (download) 
    >4ln4B (B:)
aiagfiengweglidgwygfrhqnaqgegtaadykstqsaidqitgklnrliektnqqfe
lidneftevekqignvinwtrdsitevwsynaellvamenqhtidladsemdklyervkr
qlrenaeedgtgcfeifhkcdddcmasirnntydhskyreeamqnri

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4ln4C (C:)
adpgdkiclghhavsngtkvntltergvevvnatetvertnipricskgkrtvdlgqcgl
lgtitgppqcdqflefsadliierregsdvcypgkfvneealrqilresggidkeamgft
ysgirtngatsscrrsgssfyaemkwllsntdnaafpqmtksykntrknpalivwgihhs
gstaeqtklygsgnklvtvgssnyqqsfvpspgartqvngqsgridfhwlmlnpndtvtf
sfngafiapdrasflrgksmgiqsgvqvdadcegdcyysggtiisnlpfqnidsravgkc
pryvkqrslllatgmknvpeipkgr

    Sequence, based on observed residues (ATOM records): (download) 
    >4ln4C (C:)
gdkiclghhavsngtkvntltergvevvnatetvertnipricskgkrtvdlgqcgllgt
itgppqcdqflefsadliierregsdvcypgkfvneealrqilresggidkeamgftysg
irtngatsscrrsgssfyaemkwllsntdnaafpqmtksykntrknpalivwgihhsgst
aeqtklygsgnklvtvgssnyqqsfvpspgartqvngqsgridfhwlmlnpndtvtfsfn
gafiapdrasflrgksmgiqsgvqvdadcegdcyysggtiisnlpfqnidsravgkcpry
vkqrslllatgmknvp

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4ln4D (D:)
glfgaiagfiengweglidgwygfrhqnaqgegtaadykstqsaidqitgklnrliektn
qqfelidneftevekqignvinwtrdsitevwsynaellvamenqhtidladsemdklye
rvkrqlrenaeedgtgcfeifhkcdddcmasirnntydhskyreeamqnriqidsgrlvp
r

    Sequence, based on observed residues (ATOM records): (download) 
    >4ln4D (D:)
aiagfiengweglidgwygfrhqnaqgegtaadykstqsaidqitgklnrliektnqqfe
lidneftevekqignvinwtrdsitevwsynaellvamenqhtidladsemdklyervkr
qlrenaeedgtgcfeifhkcdddcmasirnntydhskyreeamqnri

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >4ln4E (E:)
adpgdkiclghhavsngtkvntltergvevvnatetvertnipricskgkrtvdlgqcgl
lgtitgppqcdqflefsadliierregsdvcypgkfvneealrqilresggidkeamgft
ysgirtngatsscrrsgssfyaemkwllsntdnaafpqmtksykntrknpalivwgihhs
gstaeqtklygsgnklvtvgssnyqqsfvpspgartqvngqsgridfhwlmlnpndtvtf
sfngafiapdrasflrgksmgiqsgvqvdadcegdcyysggtiisnlpfqnidsravgkc
pryvkqrslllatgmknvpeipkgr

    Sequence, based on observed residues (ATOM records): (download) 
    >4ln4E (E:)
gdkiclghhavsngtkvntltergvevvnatetvertnipricskgkrtvdlgqcgllgt
itgppqcdqflefsadliierregsdvcypgkfvneealrqilresggidkeamgftysg
irtngatsscrrsgssfyaemkwllsntdnaafpqmtksykntrknpalivwgihhsgst
aeqtklygsgnklvtvgssnyqqsfvpspgartqvngqsgridfhwlmlnpndtvtfsfn
gafiapdrasflrgksmgiqsgvqvdadcegdcyysggtiisnlpfqnidsravgkcpry
vkqrslllatgmknvp

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >4ln4F (F:)
glfgaiagfiengweglidgwygfrhqnaqgegtaadykstqsaidqitgklnrliektn
qqfelidneftevekqignvinwtrdsitevwsynaellvamenqhtidladsemdklye
rvkrqlrenaeedgtgcfeifhkcdddcmasirnntydhskyreeamqnriqidsgrlvp
r

    Sequence, based on observed residues (ATOM records): (download) 
    >4ln4F (F:)
aiagfiengweglidgwygfrhqnaqgegtaadykstqsaidqitgklnrliektnqqfe
lidneftevekqignvinwtrdsitevwsynaellvamenqhtidladsemdklyervkr
qlrenaeedgtgcfeifhkcdddcmasirnntydhskyreeamqnri

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >4ln4G (G:)
adpgdkiclghhavsngtkvntltergvevvnatetvertnipricskgkrtvdlgqcgl
lgtitgppqcdqflefsadliierregsdvcypgkfvneealrqilresggidkeamgft
ysgirtngatsscrrsgssfyaemkwllsntdnaafpqmtksykntrknpalivwgihhs
gstaeqtklygsgnklvtvgssnyqqsfvpspgartqvngqsgridfhwlmlnpndtvtf
sfngafiapdrasflrgksmgiqsgvqvdadcegdcyysggtiisnlpfqnidsravgkc
pryvkqrslllatgmknvpeipkgr

    Sequence, based on observed residues (ATOM records): (download) 
    >4ln4G (G:)
gdkiclghhavsngtkvntltergvevvnatetvertnipricskgkrtvdlgqcgllgt
itgppqcdqflefsadliierregsdvcypgkfvneealrqilresggidkeamgftysg
irtngatsscrrsgssfyaemkwllsntdnaafpqmtksykntrknpalivwgihhsgst
aeqtklygsgnklvtvgssnyqqsfvpspgartqvngqsgridfhwlmlnpndtvtfsfn
gafiapdrasflrgksmgiqsgvqvdadcegdcyysggtiisnlpfqnidsravgkcpry
vkqrslllatgmknvp

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >4ln4H (H:)
glfgaiagfiengweglidgwygfrhqnaqgegtaadykstqsaidqitgklnrliektn
qqfelidneftevekqignvinwtrdsitevwsynaellvamenqhtidladsemdklye
rvkrqlrenaeedgtgcfeifhkcdddcmasirnntydhskyreeamqnriqidsgrlvp
r

    Sequence, based on observed residues (ATOM records): (download) 
    >4ln4H (H:)
iagfiengweglidgwygfrhqnaqgegtaadykstqsaidqitgklnrliektnqqfel
idneftevekqignvinwtrdsitevwsynaellvamenqhtidladsemdklyervkrq
lrenaeedgtgcfeifhkcdddcmasirnntydhskyreeamqn

  • Chain 'I':
    Sequence, based on SEQRES records: (download) 
    >4ln4I (I:)
adpgdkiclghhavsngtkvntltergvevvnatetvertnipricskgkrtvdlgqcgl
lgtitgppqcdqflefsadliierregsdvcypgkfvneealrqilresggidkeamgft
ysgirtngatsscrrsgssfyaemkwllsntdnaafpqmtksykntrknpalivwgihhs
gstaeqtklygsgnklvtvgssnyqqsfvpspgartqvngqsgridfhwlmlnpndtvtf
sfngafiapdrasflrgksmgiqsgvqvdadcegdcyysggtiisnlpfqnidsravgkc
pryvkqrslllatgmknvpeipkgr

    Sequence, based on observed residues (ATOM records): (download) 
    >4ln4I (I:)
gdkiclghhavsngtkvntltergvevvnatetvertnipricskgkrtvdlgqcgllgt
itgppqcdqflefsadliierregsdvcypgkfvneealrqilresggidkeamgftysg
irtngatsscrrsgssfyaemkwllsntdnaafpqmtksykntrknpalivwgihhsgst
aeqtklygsgnklvtvgssnyqqsfvpspgartqvngqsgridfhwlmlnpndtvtfsfn
gafiapdrasflrgksmgiqsgvqvdadcegdcyysggtiisnlpfqnidsravgkcpry
vkqrslllatgmknvp

  • Chain 'J':
    Sequence, based on SEQRES records: (download) 
    >4ln4J (J:)
glfgaiagfiengweglidgwygfrhqnaqgegtaadykstqsaidqitgklnrliektn
qqfelidneftevekqignvinwtrdsitevwsynaellvamenqhtidladsemdklye
rvkrqlrenaeedgtgcfeifhkcdddcmasirnntydhskyreeamqnriqidsgrlvp
r

    Sequence, based on observed residues (ATOM records): (download) 
    >4ln4J (J:)
iagfiengweglidgwygfrhqnaqgegtaadykstqsaidqitgklnrliektnqqfel
idneftevekqignvinwtrdsitevwsynaellvamenqhtidladsemdklyervkrq
lrenaeedgtgcfeifhkcdddcmasirnntydhskyreeamqn

  • Chain 'K':
    Sequence, based on SEQRES records: (download) 
    >4ln4K (K:)
adpgdkiclghhavsngtkvntltergvevvnatetvertnipricskgkrtvdlgqcgl
lgtitgppqcdqflefsadliierregsdvcypgkfvneealrqilresggidkeamgft
ysgirtngatsscrrsgssfyaemkwllsntdnaafpqmtksykntrknpalivwgihhs
gstaeqtklygsgnklvtvgssnyqqsfvpspgartqvngqsgridfhwlmlnpndtvtf
sfngafiapdrasflrgksmgiqsgvqvdadcegdcyysggtiisnlpfqnidsravgkc
pryvkqrslllatgmknvpeipkgr

    Sequence, based on observed residues (ATOM records): (download) 
    >4ln4K (K:)
gdkiclghhavsngtkvntltergvevvnatetvertnipricskgkrtvdlgqcgllgt
itgppqcdqflefsadliierregsdvcypgkfvneealrqilresggidkeamgftysg
irtngatsscrrsgssfyaemkwllsntdnaafpqmtksykntrknpalivwgihhsgst
aeqtklygsgnklvtvgssnyqqsfvpspgartqvngqsgridfhwlmlnpndtvtfsfn
gafiapdrasflrgksmgiqsgvqvdadcegdcyysggtiisnlpfqnidsravgkcpry
vkqrslllatgmknvp

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >4ln4L (L:)
glfgaiagfiengweglidgwygfrhqnaqgegtaadykstqsaidqitgklnrliektn
qqfelidneftevekqignvinwtrdsitevwsynaellvamenqhtidladsemdklye
rvkrqlrenaeedgtgcfeifhkcdddcmasirnntydhskyreeamqnriqidsgrlvp
r

    Sequence, based on observed residues (ATOM records): (download) 
    >4ln4L (L:)
iagfiengweglidgwygfrhqnaqgegtaadykstqsaidqitgklnrliektnqqfel
idneftevekqignvinwtrdsitevwsynaellvamenqhtidladsemdklyervkrq
lrenaeedgtgcfeifhkcdddcmasirnntydhskyreeamqn