PDB entry 4lkd

View 4lkd on RCSB PDB site
Description: crystal structure of pseudomonas aeruginosa lectin leca complexed with gala-qrs at 2.31 a resolution
Deposited on 2013-07-07, released 2013-12-18
The last revision was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 2.31 Å
R-factor: N/A
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: PA-I galactophilic lectin
    Species: Pseudomonas aeruginosa [TaxId:208964]
    Gene: lecA, pa1L, PA2570
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: PA-I galactophilic lectin
    Species: Pseudomonas aeruginosa [TaxId:208964]
    Gene: lecA, pa1L, PA2570
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: PA-I galactophilic lectin
    Species: Pseudomonas aeruginosa [TaxId:208964]
    Gene: lecA, pa1L, PA2570
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: PA-I galactophilic lectin
    Species: Pseudomonas aeruginosa [TaxId:208964]
    Gene: lecA, pa1L, PA2570
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: PA-I galactophilic lectin
    Species: Pseudomonas aeruginosa [TaxId:208964]
    Gene: lecA, pa1L, PA2570
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: PA-I galactophilic lectin
    Species: Pseudomonas aeruginosa [TaxId:208964]
    Gene: lecA, pa1L, PA2570
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: PA-I galactophilic lectin
    Species: Pseudomonas aeruginosa [TaxId:208964]
    Gene: lecA, pa1L, PA2570
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: PA-I galactophilic lectin
    Species: Pseudomonas aeruginosa [TaxId:208964]
    Gene: lecA, pa1L, PA2570
    Database cross-references and differences (RAF-indexed):
  • Chain 'I':
    Compound: peptide QRSA
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed):
    • PDB 4LKD (0-3)
  • Chain 'J':
    Compound: peptide QRSA
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed):
    • PDB 4LKD (0-End)
  • Chain 'K':
    Compound: peptide QRSA
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed):
    • PDB 4LKD (0-End)
  • Chain 'L':
    Compound: peptide QRSA
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed):
    • PDB 4LKD (0-3)
  • Chain 'M':
    Compound: peptide QRSA
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed):
    • PDB 4LKD (0-End)
  • Chain 'N':
    Compound: peptide QRSA
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed):
    • PDB 4LKD (0-End)
  • Chain 'O':
    Compound: peptide QRSA
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed):
    • PDB 4LKD (0-End)
  • Chain 'P':
    Compound: peptide QRSA
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed):
    • PDB 4LKD (0-3)
  • Heterogens: GAL, CA, PHB, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >4lkdA (A:)
awkgevlanneagqvtsiiynpgdvitivaagwasygptqkwgpqgdrehpdqglichda
fcgalvmkignsgtipvntglfrwvapnnvqgaitliyndvpgtygnnsgsfsvnigkdq
s

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >4lkdB (B:)
awkgevlanneagqvtsiiynpgdvitivaagwasygptqkwgpqgdrehpdqglichda
fcgalvmkignsgtipvntglfrwvapnnvqgaitliyndvpgtygnnsgsfsvnigkdq
s

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >4lkdC (C:)
awkgevlanneagqvtsiiynpgdvitivaagwasygptqkwgpqgdrehpdqglichda
fcgalvmkignsgtipvntglfrwvapnnvqgaitliyndvpgtygnnsgsfsvnigkdq
s

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >4lkdD (D:)
awkgevlanneagqvtsiiynpgdvitivaagwasygptqkwgpqgdrehpdqglichda
fcgalvmkignsgtipvntglfrwvapnnvqgaitliyndvpgtygnnsgsfsvnigkdq
s

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records:
    >4lkdE (E:)
awkgevlanneagqvtsiiynpgdvitivaagwasygptqkwgpqgdrehpdqglichda
fcgalvmkignsgtipvntglfrwvapnnvqgaitliyndvpgtygnnsgsfsvnigkdq
s

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records:
    >4lkdF (F:)
awkgevlanneagqvtsiiynpgdvitivaagwasygptqkwgpqgdrehpdqglichda
fcgalvmkignsgtipvntglfrwvapnnvqgaitliyndvpgtygnnsgsfsvnigkdq
s

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records:
    >4lkdG (G:)
awkgevlanneagqvtsiiynpgdvitivaagwasygptqkwgpqgdrehpdqglichda
fcgalvmkignsgtipvntglfrwvapnnvqgaitliyndvpgtygnnsgsfsvnigkdq
s

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records:
    >4lkdH (H:)
awkgevlanneagqvtsiiynpgdvitivaagwasygptqkwgpqgdrehpdqglichda
fcgalvmkignsgtipvntglfrwvapnnvqgaitliyndvpgtygnnsgsfsvnigkdq
s

  • Chain 'I':
    Sequence; same for both SEQRES and ATOM records:
    >4lkdI (I:)
qrsa

  • Chain 'J':
    Sequence, based on SEQRES records:
    >4lkdJ (J:)
qrsa

    Sequence, based on observed residues (ATOM records):
    >4lkdJ (J:)
qr

  • Chain 'K':
    Sequence, based on SEQRES records:
    >4lkdK (K:)
qrsa

    Sequence, based on observed residues (ATOM records):
    >4lkdK (K:)
qr

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records:
    >4lkdL (L:)
qrsa

  • Chain 'M':
    Sequence, based on SEQRES records:
    >4lkdM (M:)
qrsa

    Sequence, based on observed residues (ATOM records):
    >4lkdM (M:)
qrs

  • Chain 'N':
    Sequence, based on SEQRES records:
    >4lkdN (N:)
qrsa

    Sequence, based on observed residues (ATOM records):
    >4lkdN (N:)
qr

  • Chain 'O':
    Sequence, based on SEQRES records:
    >4lkdO (O:)
qrsa

    Sequence, based on observed residues (ATOM records):
    >4lkdO (O:)
qr

  • Chain 'P':
    Sequence; same for both SEQRES and ATOM records:
    >4lkdP (P:)
qrsa