PDB entry 4lk2

View 4lk2 on RCSB PDB site
Description: crystal structure of rna splicing effector prp5
Deposited on 2013-07-05, released 2013-12-11
The last revision was dated 2019-12-25, with a file datestamp of 2019-12-20.
Experiment type: XRAY
Resolution: 2.12 Å
R-factor: N/A
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Pre-mRNA-processing ATP-dependent RNA helicase PRP5
    Species: Saccharomyces cerevisiae [TaxId:559292]
    Gene: PRP5, RNA5, YBR237W, YBR1603
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Pre-mRNA-processing ATP-dependent RNA helicase PRP5
    Species: Saccharomyces cerevisiae [TaxId:559292]
    Gene: PRP5, RNA5, YBR237W, YBR1603
    Database cross-references and differences (RAF-indexed):
  • Heterogens: NI, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4lk2A (A:)
    yspeelepfqknfyiesetvssmsemeveelrlsldnikikgtgcpkpvtkwsqlglstd
    tmvliteklhfgsltpiqsqalpaimsgrdvigisktgsgktisyllpllrqvkaqrpls
    khetgpmglilaptrelalqiheevtkfteadtsirsvcctggsemkkqitdlkrgteiv
    vatpgrfidiltlndgkllstkritfvvmdeadrlfdlgfepqitqimktvrpdkqcvlf
    satfpnklrsfavrvlhspisitinskgmvnenvkqkfrichsedekfdnlvqliherse
    ffdevqsendgqssdveevdakaiifvssqnicdfiskkllnagivtcaihagkpyqerl
    mnlekfkreknsillctevlsrglnvpevslviiynavktfaqyvhttgrtargsrsgta
    itlllhdelsgayilskamrdeeikaldplqakelqemsakfesgmkkgkfrlskgfggk
    glenikskreeaq
    

    Sequence, based on observed residues (ATOM records):
    >4lk2A (A:)
    elepfqknfyiesetvssmsemeveelrlsldnikikgtgcpkpvtkwsqlglstdtmvl
    itklhfgsltpiqsqalpaimsgrdvigisktgsgktisyllpllrqvkaqrplskhetg
    pmglilaptrelalqiheevtkfteadtsirsvcctggsemkkqitdlkrgteivvatpg
    rfidiltlndgkllstkritfvvmdeadrlfdlgfepqitqimktvrpdkqcvlfsatfp
    nklrsfavrvlhspisitinskgmvnenvkqkfrichsedekfdnlvqliherseffdak
    aiifvssqnicdfiskkllnagivtcaihagkpyqerlmnlekfkreknsillctevlsr
    glnvpevslviiynavktfaqyvhttgrtargsrsgtaitlllhdelsgayilskamrde
    eikaldplqakelqemsakfesgm
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >4lk2B (B:)
    yspeelepfqknfyiesetvssmsemeveelrlsldnikikgtgcpkpvtkwsqlglstd
    tmvliteklhfgsltpiqsqalpaimsgrdvigisktgsgktisyllpllrqvkaqrpls
    khetgpmglilaptrelalqiheevtkfteadtsirsvcctggsemkkqitdlkrgteiv
    vatpgrfidiltlndgkllstkritfvvmdeadrlfdlgfepqitqimktvrpdkqcvlf
    satfpnklrsfavrvlhspisitinskgmvnenvkqkfrichsedekfdnlvqliherse
    ffdevqsendgqssdveevdakaiifvssqnicdfiskkllnagivtcaihagkpyqerl
    mnlekfkreknsillctevlsrglnvpevslviiynavktfaqyvhttgrtargsrsgta
    itlllhdelsgayilskamrdeeikaldplqakelqemsakfesgmkkgkfrlskgfggk
    glenikskreeaq
    

    Sequence, based on observed residues (ATOM records):
    >4lk2B (B:)
    elepfqknfyiesetvssmsemeveelrlsldnikikgtgcpkpvtkwsqlglstdtmvl
    iteklhfgsltpiqsqalpaimsgrdvigisktgsgktisyllpllrqvkaqrplskhet
    gpmglilaptrelalqiheevtkfteadtsirsvcctmkkqitdlkrgteivvatpgrfi
    diltlndgkllstkritfvvmdeadrlfdlgfepqitqimktvrpdkqcvlfsatfpnkl
    rsfavrvlhspisitinsgmvnenvkqkfrichsedekfdnlvqlihersevdakaiifv
    ssqnicdfiskkllnagivtcaihagkpyqerlmnlekfkreknsillctevlsrglnvp
    evslviiynavktfaqyvhttgrtarsgtaitlllhdelsgayilskamrdeeikaldpl
    qakelqemsakfesgm