PDB entry 4ljq

View 4ljq on RCSB PDB site
Description: Crystal structure of the catalytic core of E3 ligase HOIP
Deposited on 2013-07-05, released 2013-10-16
The last revision was dated 2013-12-18, with a file datestamp of 2013-12-13.
Experiment type: XRAY
Resolution: 2.45 Å
R-factor: 0.209
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: E3 ubiquitin-protein ligase RNF31
    Species: Homo sapiens [TaxId:9606]
    Gene: RNF31, ZIBRA
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: E3 ubiquitin-protein ligase RNF31
    Species: Homo sapiens [TaxId:9606]
    Gene: RNF31, ZIBRA
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: E3 ubiquitin-protein ligase RNF31
    Species: Homo sapiens [TaxId:9606]
    Gene: RNF31, ZIBRA
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: E3 ubiquitin-protein ligase RNF31
    Species: Homo sapiens [TaxId:9606]
    Gene: RNF31, ZIBRA
    Database cross-references and differences (RAF-indexed):
  • Heterogens: ZN, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4ljqA (A:)
gpgpeyqaqglamylqengidcpkckfsyalarggcmhfhctqcrhqfcsgcynafyakn
kcpepncrvkkslhghhprdclfylrdwtalrlqkllqdnnvmfnteppagaravpgggc
rvieqkevpnglrdeacgketpagyaglcqahykeylvslinahsldpatlyeveeleta
terylhvrpqplagedppayqarllqklteevplgqsiprrrk

    Sequence, based on observed residues (ATOM records):
    >4ljqA (A:)
qglamylqegidcpkckfsyacmhfhctqcrhqfcsgcynafyaknkcpepncrvkkslh
ghhprdclfylrdwtalrlqkllqdnnvmfnteppggcrviedeacgketpagyaglcqa
hykeylvslinahsldpatlyeveeletaterylhvrpqplagedppayqarllqkltee
vplgqsiprr

  • Chain 'B':
    Sequence, based on SEQRES records:
    >4ljqB (B:)
gpgpeyqaqglamylqengidcpkckfsyalarggcmhfhctqcrhqfcsgcynafyakn
kcpepncrvkkslhghhprdclfylrdwtalrlqkllqdnnvmfnteppagaravpgggc
rvieqkevpnglrdeacgketpagyaglcqahykeylvslinahsldpatlyeveeleta
terylhvrpqplagedppayqarllqklteevplgqsiprrrk

    Sequence, based on observed residues (ATOM records):
    >4ljqB (B:)
qglamylqegidcpkckfsyalcmhfhctqcrhqfcsgcynafyaknkcpepncrvkksl
hghhprdclfylrdwtalrlqkllqdnnvmfnteppgcrvieqkdeacgketpagyaglc
qahykeylvslinahsldpatlyeveeletaterylhvrpqplagedppayqarllqklt
eevplgqsiprr

  • Chain 'C':
    Sequence, based on SEQRES records:
    >4ljqC (C:)
gpgpeyqaqglamylqengidcpkckfsyalarggcmhfhctqcrhqfcsgcynafyakn
kcpepncrvkkslhghhprdclfylrdwtalrlqkllqdnnvmfnteppagaravpgggc
rvieqkevpnglrdeacgketpagyaglcqahykeylvslinahsldpatlyeveeleta
terylhvrpqplagedppayqarllqklteevplgqsiprrrk

    Sequence, based on observed residues (ATOM records):
    >4ljqC (C:)
qglamylqegidcpkckfsyalgcmhfhctqcrhqfcsgcynafyaknkcpepncrvkks
lhghhprdclfylrdwtalrlqkllqdnnvmfnteppggcrviedeacgketpagyaglc
qahykeylvslinahsldpatlyeveeletaterylhvrpqplagedppayqarllqklt
eevplgqsiprr

  • Chain 'D':
    Sequence, based on SEQRES records:
    >4ljqD (D:)
gpgpeyqaqglamylqengidcpkckfsyalarggcmhfhctqcrhqfcsgcynafyakn
kcpepncrvkkslhghhprdclfylrdwtalrlqkllqdnnvmfnteppagaravpgggc
rvieqkevpnglrdeacgketpagyaglcqahykeylvslinahsldpatlyeveeleta
terylhvrpqplagedppayqarllqklteevplgqsiprrrk

    Sequence, based on observed residues (ATOM records):
    >4ljqD (D:)
glamylqegidcpkckfsyagcmhfhctqcrhqfcsgcynafyaknkcpepncrvkkslh
ghhprdclfylrdwtalrlqkllqdnnvmfnteppggcrviedeacgketpagyaglcqa
hykeylvslinahsldpatlyeveeletaterylhvrpqplagedppayqarllqkltee
vplgqsiprr