PDB entry 4lhq

View 4lhq on RCSB PDB site
Description: Ricin A chain bound to camelid nanobody (VHH8)
Class: hydrolase/immune system
Keywords: Ribosome inhibiting protein, HYDROLASE-IMMUNE SYSTEM complex
Deposited on 2013-07-01, released 2014-06-11
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-11-15, with a file datestamp of 2017-11-10.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ricin
    Species: Ricinus communis [TaxId:3988]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4lhqa_
  • Chain 'B':
    Compound: Camelid nanobody
    Species: Vicugna pacos [TaxId:30538]
    Database cross-references and differences (RAF-indexed):
    • PDB 4LHQ (0-127)
    Domains in SCOPe 2.08: d4lhqb_
  • Chain 'C':
    Compound: ricin
    Species: Ricinus communis [TaxId:3988]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4lhqc_
  • Chain 'D':
    Compound: Camelid nanobody
    Species: Vicugna pacos [TaxId:30538]
    Database cross-references and differences (RAF-indexed):
    • PDB 4LHQ (0-127)
    Domains in SCOPe 2.08: d4lhqd_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4lhqA (A:)
kqypiinfttagatvqsytnfiravrgrlttgadvrheipvlpnrvglpinqrfilvels
nhaelsvtlaldvtnayvvgyragnsayffhpdnqedaeaithlftdvqnrytfafggny
drleqlagnlrenielgngpleeaisalyyystggtqlptlarsfiiciqmiseaarfqy
iegemrtrirynrrsapdpsvitlenswgrlstaiqesnqgafaspiqlqrrngskfsvy
dvsilipiialmvyrcappp

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4lhqB (B:)
vqlvetgggtvqtggslrlscsasggsfsrnamgwfrqapgkerefvaainwsasstyyr
dsvkgrftvsrdnakntvylhlnslkledtaayycagssvyaempyadsvkatsynywgq
gtqvtvss

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4lhqC (C:)
kqypiinfttagatvqsytnfiravrgrlttgadvrheipvlpnrvglpinqrfilvels
nhaelsvtlaldvtnayvvgyragnsayffhpdnqedaeaithlftdvqnrytfafggny
drleqlagnlrenielgngpleeaisalyyystggtqlptlarsfiiciqmiseaarfqy
iegemrtrirynrrsapdpsvitlenswgrlstaiqesnqgafaspiqlqrrngskfsvy
dvsilipiialmvyrcappp

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4lhqD (D:)
vqlvetgggtvqtggslrlscsasggsfsrnamgwfrqapgkerefvaainwsasstyyr
dsvkgrftvsrdnakntvylhlnslkledtaayycagssvyaempyadsvkatsynywgq
gtqvtvss