PDB entry 4lhj
View 4lhj on RCSB PDB site
Description: Ricin A chain bound to camelid nanobody (VHH5)
Class: hydrolase/immune system
Keywords: Ribosome inhibiting protein, HYDROLASE-IMMUNE SYSTEM complex
Deposited on
2013-07-01, released
2014-06-11
The last revision prior to the SCOPe 2.08 freeze date was dated
2017-11-15, with a file datestamp of
2017-11-10.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: N/A
AEROSPACI score: 0.37
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: ricin
Species: Ricinus communis [TaxId:3988]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4lhja_ - Chain 'B':
Compound: Camelid antibody
Species: Vicugna pacos [TaxId:30538]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4lhjb_ - Heterogens: CL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4lhjA (A:)
kqypiinfttagatvqsytnfiravrgrlttgadvrheipvlpnrvglpinqrfilvels
nhaelsvtlaldvtnayvvgyragnsayffhpdnqedaeaithlftdvqnrytfafggny
drleqlagnlrenielgngpleeaisalyyystggtqlptlarsfiiciqmiseaarfqy
iegemrtrirynrrsapdpsvitlenswgrlstaiqesnqgafaspiqlqrrngskfsvy
dvsilipiialmvyrcapp
Sequence, based on observed residues (ATOM records): (download)
>4lhjA (A:)
kqypiinfttagatvqsytnfiravrgrlttgadvrheipvlpnrvglpinqrfilvels
nhaelsvtlaldvtnayvvgyragnsayffhpdnqedaeaithlftdvqnrytfafggny
drleqlagnlrenielgngpleeaisalyyystggtqlptlarsfiiciqmiseaarfqy
iegemrtrirynrrsapdpsvitlenswgrlstaiqesnqgafapiqlqrrngskfsvyd
vsilipiialmvyrcapp
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>4lhjB (B:)
qvqlvesggglvqaggslrlscaasgsivnfetmgwyrqapgkerelvatitnegssnya
dsvkgrftisgdnakntvslqmnslkpedtavyycsatfgsrwpyahsdhwgqgtqvtvs