PDB entry 4lgs

View 4lgs on RCSB PDB site
Description: Ricin A chain bound to camelid nanobody (VHH4)
Class: hydrolase/immune system
Keywords: Ribosomal inhibiting protein 2, HYDROLASE-IMMUNE SYSTEM complex
Deposited on 2013-06-28, released 2014-06-11
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-11-15, with a file datestamp of 2017-11-10.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: N/A
AEROSPACI score: 0.18 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ricin
    Species: Ricinus communis [TaxId:3988]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4lgsa_
  • Chain 'B':
    Compound: Camelid nanobody (VHH4)
    Species: Vicugna pacos [TaxId:30538]
    Database cross-references and differences (RAF-indexed):
    • PDB 4LGS (0-128)
    Domains in SCOPe 2.08: d4lgsb_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4lgsA (A:)
kqypiinfttagatvqsytnfiravrgrlttgadvrheipvlpnrvglpinqrfilvels
nhaelsvtlaldvtnayvvgyragnsayffhpdnqedaeaithlftdvqnrytfafggny
drleqlagnlrenielgngpleeaisalyyystggtqlptlarsfiiciqmiseaarfqy
iegemrtrirynrrsapdpsvitlenswgrlstaiqesnqgafaspiqlqrrngskfsvy
dvsilipiialmvyrcapppssq

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4lgsB (B:)
qvqlvesggglvqaggslslscaasggdfsrnamawfrqapgkerefvasinwtgsgtyy
ldsvkgrftisrdnaknalylqmnnlkpedtavyycarstvfaeitglagyqsgsydywg
qgtqvtvss