PDB entry 4ldy

View 4ldy on RCSB PDB site
Description: Crystal structure of the DNA binding domain of the G245A mutant of arabidopsis thaliana auxin reponse factor 1
Deposited on 2013-06-25, released 2014-02-12
The last revision was dated 2014-02-19, with a file datestamp of 2014-02-14.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.213
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Auxin response factor 1
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: ARF1, At1g59750, F23H11.7
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8L7G0 (Start-354)
      • engineered mutation (244)
      • expression tag (355)
  • Chain 'B':
    Compound: Auxin response factor 1
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: ARF1, At1g59750, F23H11.7
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8L7G0 (Start-354)
      • engineered mutation (244)
      • expression tag (355)
  • Heterogens: CL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4ldyA (A:)
maasnhssgkpggvlsdalcrelwhacagplvtlpregervyyfpeghmeqleasmhqgl
eqqmpsfnlpskilckviniqrraepetdevyaqitllpeldqseptspdapvqepekct
vhsfcktltasdtsthggfsvlrrhaddclppldmsqqppwqelvatdlhnsewhfrhif
rgqprrhllttgwsvfvsskklvagdafiflrgeneelrvgvrrhmrqqtnipssvissh
smhiavlataahaittgtifsvfykprtsrsefivsvnryleaktqklsvgmrfkmrfeg
eeapekrfsgtivgvqenkssvwhdsewrslkvqwdepssvfrpervspweleplnsysq
sm

    Sequence, based on observed residues (ATOM records):
    >4ldyA (A:)
sdalcrelwhacagplvtlpregervyyfpeghmeqleampsfnlpskilckviniqrra
epetdevyaqitllpeldqseptspdapvqepekctvhsfcktltasdtsthggfsvlrr
haddclppldmsqqppwqelvatdlhnsewhfrhifrgqprrhllttgwsvfvsskklva
gdafiflrgeneelrvgvrrhmrsmhiavlataahaittgtifsvfykprtsrsefivsv
nryleaktqklsvgmrfkmrfegeeapekrfsgtivgvqenkssvwhdsewrslkvqwde
pssvfrpervspwelepln

  • Chain 'B':
    Sequence, based on SEQRES records:
    >4ldyB (B:)
maasnhssgkpggvlsdalcrelwhacagplvtlpregervyyfpeghmeqleasmhqgl
eqqmpsfnlpskilckviniqrraepetdevyaqitllpeldqseptspdapvqepekct
vhsfcktltasdtsthggfsvlrrhaddclppldmsqqppwqelvatdlhnsewhfrhif
rgqprrhllttgwsvfvsskklvagdafiflrgeneelrvgvrrhmrqqtnipssvissh
smhiavlataahaittgtifsvfykprtsrsefivsvnryleaktqklsvgmrfkmrfeg
eeapekrfsgtivgvqenkssvwhdsewrslkvqwdepssvfrpervspweleplnsysq
sm

    Sequence, based on observed residues (ATOM records):
    >4ldyB (B:)
sdalcrelwhacagplvtlpregervyyfpeghmeqleasmhqqqmpsfnlpskilckvi
niqrraepetdevyaqitllpeldqseptspdapvqekctvhsfcktltasdtsthggfs
vlrrhaddclppldmsqqppwqelvatdlhnsewhfrhifrgqprrhllttgwsvfvssk
klvagdafiflrgeneelrvgvrrhmrpssvisshsmhiavlataahaittgtifsvfyk
prtsrsefivsvnryleaktqklsvgmrfkmrfegeeapekrfsgtivgvqenkssvwhd
sewrslkvqwdepssvfrpervspwelepln