PDB entry 4ld4

View 4ld4 on RCSB PDB site
Description: Crystal structure of NE0047 in complex with cytosine
Class: hydrolase
Keywords: CDA fold, deaminase, HYDROLASE
Deposited on 2013-06-24, released 2014-01-22
The last revision prior to the SCOPe 2.08 freeze date was dated 2014-01-22, with a file datestamp of 2014-01-17.
Experiment type: XRAY
Resolution: 3 Å
R-factor: 0.194
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Cytidine and deoxycytidylate deaminase zinc-binding region
    Species: Nitrosomonas europaea [TaxId:228410]
    Gene: NE0047
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4ld4a_
  • Chain 'B':
    Compound: Cytidine and deoxycytidylate deaminase zinc-binding region
    Species: Nitrosomonas europaea [TaxId:228410]
    Gene: NE0047
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q82Y41 (2-End)
      • expression tag (0-1)
    Domains in SCOPe 2.08: d4ld4b1, d4ld4b2
  • Heterogens: ZN, CYT, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4ld4A (A:)
ghmndalhiglppflvqanneprvlaapearmgyvlelvraniaadggpfaaavferdsg
lliaagtnrvvpgrcsaahaeilalslaqakldthdlsadglpacelvtsaepcvmcfga
viwsgvrslvcaarsddveaigfdegprpenwmggleargitvttgllrdaacallreyn
acngviynarcgvhkgs

    Sequence, based on observed residues (ATOM records): (download) 
    >4ld4A (A:)
mndalhiglppflvqanneprvlaapearmgyvlelvraniaadggpfaaavferdsgll
iaagtnrvvpgrcsaahaeilalslaqakldthdlsadglpacelvtsaepcvmcfgavi
wsgvrslvcaarsddveaigfdegprpenwmggleargitvttgllrdaacallreynac
ngviynarc

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4ld4B (B:)
ghmndalhiglppflvqanneprvlaapearmgyvlelvraniaadggpfaaavferdsg
lliaagtnrvvpgrcsaahaeilalslaqakldthdlsadglpacelvtsaepcvmcfga
viwsgvrslvcaarsddveaigfdegprpenwmggleargitvttgllrdaacallreyn
acngviynarcgvhkgs

    Sequence, based on observed residues (ATOM records): (download) 
    >4ld4B (B:)
ghmndalhiglppflvqanneprvlaapearmgyvlelvraniaadggpfaaavferdsg
lliaagtnrvvpgrcsaahaeilalslaqakldthdlsadglpacelvtsaepcvmcfga
viwsgvrslvcaarsddveaigfdegprpenwmggleargitvttgllrdaacallreyn
ac