PDB entry 4lcy
View 4lcy on RCSB PDB site
Description: Crystal structure of HLA-b46 at 1.6 angstrom resolution
Deposited on
2013-06-24, released
2014-06-25
The last revision was dated
2014-06-25, with a file datestamp of
2014-06-20.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: 0.174
AEROSPACI score: 0.52
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: HLA class I histocompatibility antigen, B-46 alpha chain
Species: Homo sapiens [TaxId:9606]
Gene: HLA, HLA-B, HLAB
Database cross-references and differences (RAF-indexed):
- Chain 'B':
Compound: Beta-2-microglobulin
Species: Homo sapiens [TaxId:9606]
Gene: B2M, Beta 2 microglobulin, CDABP0092, HDCMA22P
Database cross-references and differences (RAF-indexed):
- Chain 'C':
Compound: dengue1 poly peptide
Species: Dengue virus 1, synthetic [TaxId:11053]
Database cross-references and differences (RAF-indexed):
- Chain 'F':
Compound: HLA class I histocompatibility antigen, B-46 alpha chain
Species: Homo sapiens [TaxId:9606]
Gene: HLA, HLA-B, HLAB
Database cross-references and differences (RAF-indexed):
- Chain 'H':
Compound: Beta-2-microglobulin
Species: Homo sapiens [TaxId:9606]
Gene: B2M, Beta 2 microglobulin, CDABP0092, HDCMA22P
Database cross-references and differences (RAF-indexed):
- Chain 'J':
Compound: dengue1 poly peptide
Species: Dengue virus 1, synthetic [TaxId:11053]
Database cross-references and differences (RAF-indexed):
- Heterogens: NA, HOH
PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.
- Chain 'A':
Sequence; same for both SEQRES and ATOM records:
>4lcyA (A:)
gshsmryfytamsrpgrgeprfiavgyvddtqfvrfdsdaasprmaprapwieqegpeyw
dretqkykrqaqtdrvslrnlrgyynqseagshtlqrmygcdvgpdgrllrghdqsaydg
kdyialnedlsswtaadtaaqitqrkweaareaeqwrayleglcvewlrrylengketlq
radppkthvthhpisdheatlrcwalgfypaeitltwqrdgedqtqdtelvetrpagdrt
fqkwaavvvpsgeeqrytchvqheglpkpltlrw
- Chain 'B':
Sequence; same for both SEQRES and ATOM records:
>4lcyB (B:)
miqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskd
wsfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm
- Chain 'C':
Sequence; same for both SEQRES and ATOM records:
>4lcyC (C:)
ftmrllspv
- Chain 'F':
Sequence; same for both SEQRES and ATOM records:
>4lcyF (F:)
gshsmryfytamsrpgrgeprfiavgyvddtqfvrfdsdaasprmaprapwieqegpeyw
dretqkykrqaqtdrvslrnlrgyynqseagshtlqrmygcdvgpdgrllrghdqsaydg
kdyialnedlsswtaadtaaqitqrkweaareaeqwrayleglcvewlrrylengketlq
radppkthvthhpisdheatlrcwalgfypaeitltwqrdgedqtqdtelvetrpagdrt
fqkwaavvvpsgeeqrytchvqheglpkpltlrw
- Chain 'H':
Sequence; same for both SEQRES and ATOM records:
>4lcyH (H:)
miqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskd
wsfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm
- Chain 'J':
Sequence; same for both SEQRES and ATOM records:
>4lcyJ (J:)
ftmrllspv