PDB entry 4l9d

View 4l9d on RCSB PDB site
Description: Crystal structure of the PKD1 domain from Vibrio cholerae metalloprotease PrtV
Deposited on 2013-06-18, released 2013-07-10
The last revision was dated 2013-08-14, with a file datestamp of 2013-08-09.
Experiment type: XRAY
Resolution: 1.1 Å
R-factor: 0.111
AEROSPACI score: 0.94 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Protease
    Species: Vibrio cholerae [TaxId:579112]
    Gene: prtV, VCM66_A0219
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Protease
    Species: Vibrio cholerae [TaxId:579112]
    Gene: prtV, VCM66_A0219
    Database cross-references and differences (RAF-indexed):
  • Heterogens: NA, CL, CA, PEG, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4l9dA (A:)
gameniapvarfelkveglsvmsqntssdsdgnivsylwdfgngqtsteaaptwsytkag
sysvtltvtddkgdsdthqqtikvdtpn

    Sequence, based on observed residues (ATOM records):
    >4l9dA (A:)
iapvarfelkveglsvmsqntssdsdgnivsylwdfgngqtsteaaptwsytkagsysvt
ltvtddkgdsdthqqtikvdtp

  • Chain 'B':
    Sequence, based on SEQRES records:
    >4l9dB (B:)
gameniapvarfelkveglsvmsqntssdsdgnivsylwdfgngqtsteaaptwsytkag
sysvtltvtddkgdsdthqqtikvdtpn

    Sequence, based on observed residues (ATOM records):
    >4l9dB (B:)
iapvarfelkveglsvmsqntssdsdgnivsylwdfgngqtsteaaptwsytkagsysvt
ltvtddkgdsdthqqtikvdt