PDB entry 4l80

View 4l80 on RCSB PDB site
Description: Crystal Structure of Chloroflexus aurantiacus malyl-CoA lyase in complex with magnesium, oxalate, and propionyl-CoA
Deposited on 2013-06-15, released 2013-12-04
The last revision was dated 2013-12-04, with a file datestamp of 2013-11-29.
Experiment type: XRAY
Resolution: 2.01 Å
R-factor: 0.173
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: HpcH/HpaI aldolase
    Species: Chloroflexus aurantiacus [TaxId:1108]
    Gene: Caur_0174, mcl
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: HpcH/HpaI aldolase
    Species: Chloroflexus aurantiacus [TaxId:1108]
    Gene: Caur_0174, mcl
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: HpcH/HpaI aldolase
    Species: Chloroflexus aurantiacus [TaxId:1108]
    Gene: Caur_0174, mcl
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: HpcH/HpaI aldolase
    Species: Chloroflexus aurantiacus [TaxId:1108]
    Gene: Caur_0174, mcl
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: HpcH/HpaI aldolase
    Species: Chloroflexus aurantiacus [TaxId:1108]
    Gene: Caur_0174, mcl
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: HpcH/HpaI aldolase
    Species: Chloroflexus aurantiacus [TaxId:1108]
    Gene: Caur_0174, mcl
    Database cross-references and differences (RAF-indexed):
  • Heterogens: 1VU, OXL, MG, TRS, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4l80A (A:)
mrklahnfykplaigapepirelpvrpervvhffpphvekiraripevakqvdvlcgnle
daipmdakeaarngfievvkatdfgdtalwvrvnalnspwvlddiaeivaavgnkldvim
ipkvegpwdihfvdqylallearhqikkpilihalletaqgmvnleeiagasprmhgfsl
gpadlaasrgmkttrvggghpfygvladpqegqaerpfyqqdlwhytiarmvdvavahgl
rafygpfgdikdeaaceaqfrnafllgctgawslapnqipiakrvfspdvnevlfakril
eampdgsgvamidgkmqddatwkqakvivdlarmiakkdpdlaqaygl

    Sequence, based on observed residues (ATOM records):
    >4l80A (A:)
rklahnfykplaigapepirelpvrpervvhffpphvekiraripevakqvdvlcgnled
aipmdakeaarngfievvkatdfgdtalwvrvnalnspwvlddiaeivaavgnkldvimi
pkvegpwdihfvdqylallearhqikkpilihalletaqgmvnleeiagasprmhgfslg
padlaasrgmkttrvggghpfygvladpqegqaerpfyqqdlwhytiarmvdvavahglr
afygpfgdikdeaaceaqfrnafllgctgawslapnqipiakrvfspdvnevlfakrile
ampdgsgvamidgkmqddatwkqakvivdlarmiakkdpdlaqay

  • Chain 'B':
    Sequence, based on SEQRES records:
    >4l80B (B:)
mrklahnfykplaigapepirelpvrpervvhffpphvekiraripevakqvdvlcgnle
daipmdakeaarngfievvkatdfgdtalwvrvnalnspwvlddiaeivaavgnkldvim
ipkvegpwdihfvdqylallearhqikkpilihalletaqgmvnleeiagasprmhgfsl
gpadlaasrgmkttrvggghpfygvladpqegqaerpfyqqdlwhytiarmvdvavahgl
rafygpfgdikdeaaceaqfrnafllgctgawslapnqipiakrvfspdvnevlfakril
eampdgsgvamidgkmqddatwkqakvivdlarmiakkdpdlaqaygl

    Sequence, based on observed residues (ATOM records):
    >4l80B (B:)
rklahnfykplaigapepirelpvrpervvhffpphvekiraripevakqvdvlcgnled
aipmdakeaarngfievvkatdfgdtalwvrvnalnspwvlddiaeivaavgnkldvimi
pkvegpwdihfvdqylallearhqikkpilihalletaqgmvnleeiagasprmhgfslg
padlaasrgmkttrvggghpfygvladpqegqaerpfyqqdlwhytiarmvdvavahglr
afygpfgdikdeaaceaqfrnafllgctgawslapnqipiakrvfspdvnevlfakrile
ampdgsgvamidgkmqddatwkqakvivdlarmiakkdpdlaqaygl

  • Chain 'C':
    Sequence, based on SEQRES records:
    >4l80C (C:)
mrklahnfykplaigapepirelpvrpervvhffpphvekiraripevakqvdvlcgnle
daipmdakeaarngfievvkatdfgdtalwvrvnalnspwvlddiaeivaavgnkldvim
ipkvegpwdihfvdqylallearhqikkpilihalletaqgmvnleeiagasprmhgfsl
gpadlaasrgmkttrvggghpfygvladpqegqaerpfyqqdlwhytiarmvdvavahgl
rafygpfgdikdeaaceaqfrnafllgctgawslapnqipiakrvfspdvnevlfakril
eampdgsgvamidgkmqddatwkqakvivdlarmiakkdpdlaqaygl

    Sequence, based on observed residues (ATOM records):
    >4l80C (C:)
rklahnfykplaigapepirelpvrpervvhffpphvekiraripevakqvdvlcgnled
aipmdakeaarngfievvkatdfgdtalwvrvnalnspwvlddiaeivaavgnkldvimi
pkvegpwdihfvdqylallearhqikkpilihalletaqgmvnleeiagasprmhgfslg
padlaasrgmkttrvggghpfygvladpqegqaerpfyqqdlwhytiarmvdvavahglr
afygpfgdikdeaaceaqfrnafllgctgawslapnqipiakrvfspdvnevlfakrile
ampdgsgvamidgkmqddatwkqakvivdlarmiakkdpdlaqaygl

  • Chain 'D':
    Sequence, based on SEQRES records:
    >4l80D (D:)
mrklahnfykplaigapepirelpvrpervvhffpphvekiraripevakqvdvlcgnle
daipmdakeaarngfievvkatdfgdtalwvrvnalnspwvlddiaeivaavgnkldvim
ipkvegpwdihfvdqylallearhqikkpilihalletaqgmvnleeiagasprmhgfsl
gpadlaasrgmkttrvggghpfygvladpqegqaerpfyqqdlwhytiarmvdvavahgl
rafygpfgdikdeaaceaqfrnafllgctgawslapnqipiakrvfspdvnevlfakril
eampdgsgvamidgkmqddatwkqakvivdlarmiakkdpdlaqaygl

    Sequence, based on observed residues (ATOM records):
    >4l80D (D:)
rklahnfykplaigapepirelpvrpervvhffpphvekiraripevakqvdvlcgnled
aipmdakeaarngfievvkatdfgdtalwvrvnalnspwvlddiaeivaavgnkldvimi
pkvegpwdihfvdqylallearhqikkpilihalletaqgmvnleeiagasprmhgfslg
padlaasrgmkttrvggghpfygvladpqaerpfyqqdlwhytiarmvdvavahglrafy
gpfgdikdeaaceaqfrnafllgctgawslapnqipiakrvfspdvnevlfakrileamp
dgsgvamidgkmqddatwkqakvivdlarmiakkdpdlaqaygl

  • Chain 'E':
    Sequence, based on SEQRES records:
    >4l80E (E:)
mrklahnfykplaigapepirelpvrpervvhffpphvekiraripevakqvdvlcgnle
daipmdakeaarngfievvkatdfgdtalwvrvnalnspwvlddiaeivaavgnkldvim
ipkvegpwdihfvdqylallearhqikkpilihalletaqgmvnleeiagasprmhgfsl
gpadlaasrgmkttrvggghpfygvladpqegqaerpfyqqdlwhytiarmvdvavahgl
rafygpfgdikdeaaceaqfrnafllgctgawslapnqipiakrvfspdvnevlfakril
eampdgsgvamidgkmqddatwkqakvivdlarmiakkdpdlaqaygl

    Sequence, based on observed residues (ATOM records):
    >4l80E (E:)
rklahnfykplaigapepirelpvrpervvhffpphvekiraripevakqvdvlcgnled
aipmdakeaarngfievvkatdfgdtalwvrvnalnspwvlddiaeivaavgnkldvimi
pkvegpwdihfvdqylallearhqikkpilihalletaqgmvnleeiagasprmhgfslg
padlaasrgmkttrvggghpfygvladpqaerpfyqqdlwhytiarmvdvavahglrafy
gpfgdikdeaaceaqfrnafllgctgawslapnqipiakrvfspdvnevlfakrileamp
dgsgvamidgkmqddatwkqakvivdlarmiakkdpdlaqaygl

  • Chain 'F':
    Sequence, based on SEQRES records:
    >4l80F (F:)
mrklahnfykplaigapepirelpvrpervvhffpphvekiraripevakqvdvlcgnle
daipmdakeaarngfievvkatdfgdtalwvrvnalnspwvlddiaeivaavgnkldvim
ipkvegpwdihfvdqylallearhqikkpilihalletaqgmvnleeiagasprmhgfsl
gpadlaasrgmkttrvggghpfygvladpqegqaerpfyqqdlwhytiarmvdvavahgl
rafygpfgdikdeaaceaqfrnafllgctgawslapnqipiakrvfspdvnevlfakril
eampdgsgvamidgkmqddatwkqakvivdlarmiakkdpdlaqaygl

    Sequence, based on observed residues (ATOM records):
    >4l80F (F:)
rklahnfykplaigapepirelpvrpervvhffpphvekiraripevakqvdvlcgnled
aipmdakeaarngfievvkatdfgdtalwvrvnalnspwvlddiaeivaavgnkldvimi
pkvegpwdihfvdqylallearhqikkpilihalletaqgmvnleeiagasprmhgfslg
padlaasrgmkttrvggghpfygvladpqegqaerpfyqqdlwhytiarmvdvavahglr
afygpfgdikdeaaceaqfrnafllgctgawslapnqipiakrvfspdvnevlfakrile
ampdgsgvamidgkmqddatwkqakvivdlarmiakkdpdlaqaygl