PDB entry 4l5i

View 4l5i on RCSB PDB site
Description: Crystal structures of the LsrR proteins complexed with phospho-AI-2 and its two different analogs reveal distinct mechanisms for ligand recognition
Deposited on 2013-06-11, released 2013-11-06
The last revision was dated 2013-11-06, with a file datestamp of 2013-11-01.
Experiment type: XRAY
Resolution: 3.21 Å
R-factor: 0.226
AEROSPACI score: 0.12 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Transcriptional regulator LsrR
    Species: Escherichia coli [TaxId:83333]
    Gene: lsrR, ydeW, b1512, JW1505
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Transcriptional regulator LsrR
    Species: Escherichia coli [TaxId:83333]
    Gene: lsrR, ydeW, b1512, JW1505
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Transcriptional regulator LsrR
    Species: Escherichia coli [TaxId:83333]
    Gene: lsrR, ydeW, b1512, JW1505
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Transcriptional regulator LsrR
    Species: Escherichia coli [TaxId:83333]
    Gene: lsrR, ydeW, b1512, JW1505
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4l5iA (A:)
smtindsaiseqgmceeeqvariawfyyhdgltqseisdrlgltrlkvsrllekghqsgi
irvqinsrfegcleyetqlrrqfslqhvrvipgladadvggrlgigaahmlmsllqpqqm
laigfgeatmntlqrlsgfissqqirlvtlsggvgsymtgigqlnaacsvniipaplras
sadiartlknencvkdvllaaqaadvaivgigavsqqddatiirsgyisqgeqlmigrkg
avgdilgyffdakgdvvtnikihneliglplsalktipvrvgvaggenkaeaiaaamkgg
yinalvtdqdtaaailrs

    Sequence, based on observed residues (ATOM records):
    >4l5iA (A:)
gmceeeqvariawfyyhdgltqseisdrlgltrlkvsrllekghqsgiirvqinsrfegc
leyetqlrrqfslqhvrvipgladadvggrlgigaahmlmsllqpqqmlaigfgeatmnt
lqrlsgfissqqirlvtlsggvgsymtgigqlnaacsvniipaplrassadiartlknen
cvkdvllaaqaadvaivgigavsqqddatiirsgyisqgeqlmigrkgavgdilgyffda
kgdvvtnikihneliglplsalktipvrvgvaggenkaeaiaaamkggyinalvtdqdta
aailrs

  • Chain 'B':
    Sequence, based on SEQRES records:
    >4l5iB (B:)
smtindsaiseqgmceeeqvariawfyyhdgltqseisdrlgltrlkvsrllekghqsgi
irvqinsrfegcleyetqlrrqfslqhvrvipgladadvggrlgigaahmlmsllqpqqm
laigfgeatmntlqrlsgfissqqirlvtlsggvgsymtgigqlnaacsvniipaplras
sadiartlknencvkdvllaaqaadvaivgigavsqqddatiirsgyisqgeqlmigrkg
avgdilgyffdakgdvvtnikihneliglplsalktipvrvgvaggenkaeaiaaamkgg
yinalvtdqdtaaailrs

    Sequence, based on observed residues (ATOM records):
    >4l5iB (B:)
eqgmceeeqvariawfyyhdgltqseisdrlgltrlkvsrllekghqsgiirvqinsrfe
gcleyetqlrrqfslqhvrvipgladadvggrlgigaahmlmsllqpqqmlaigfgeatm
ntlqrlsgfissqqirlvtlsggvgsymtgigqlnaacsvniipaplrassadiartlkn
encvkdvllaaqaadvaivgigavsqqddatiirsgyisqgeqlmigrkgavgdilgyff
dakgdvvtnikihneliglplsalktipvrvgvaggenkaeaiaaamkggyinalvtdqd
taaailrs

  • Chain 'C':
    Sequence, based on SEQRES records:
    >4l5iC (C:)
smtindsaiseqgmceeeqvariawfyyhdgltqseisdrlgltrlkvsrllekghqsgi
irvqinsrfegcleyetqlrrqfslqhvrvipgladadvggrlgigaahmlmsllqpqqm
laigfgeatmntlqrlsgfissqqirlvtlsggvgsymtgigqlnaacsvniipaplras
sadiartlknencvkdvllaaqaadvaivgigavsqqddatiirsgyisqgeqlmigrkg
avgdilgyffdakgdvvtnikihneliglplsalktipvrvgvaggenkaeaiaaamkgg
yinalvtdqdtaaailrs

    Sequence, based on observed residues (ATOM records):
    >4l5iC (C:)
eqgmceeeqvariawfyyhdgltqseisdrlgltrlkvsrllekghqsgiirvqinsrfe
gcleyetqlrrqfslqhvrvipgladadvggrlgigaahmlmsllqpqqmlaigfgeatm
ntlqrlsgfissqqirlvtlsggvgsymtgigqlnaacsvniipaplrassadiartlkn
encvkdvllaaqaadvaivgigavsqqddatiirsgyisqgeqlmigrkgavgdilgyff
dakgdvvtnikihneliglplsalktipvrvgvaggenkaeaiaaamkggyinalvtdqd
taaailrs

  • Chain 'D':
    Sequence, based on SEQRES records:
    >4l5iD (D:)
smtindsaiseqgmceeeqvariawfyyhdgltqseisdrlgltrlkvsrllekghqsgi
irvqinsrfegcleyetqlrrqfslqhvrvipgladadvggrlgigaahmlmsllqpqqm
laigfgeatmntlqrlsgfissqqirlvtlsggvgsymtgigqlnaacsvniipaplras
sadiartlknencvkdvllaaqaadvaivgigavsqqddatiirsgyisqgeqlmigrkg
avgdilgyffdakgdvvtnikihneliglplsalktipvrvgvaggenkaeaiaaamkgg
yinalvtdqdtaaailrs

    Sequence, based on observed residues (ATOM records):
    >4l5iD (D:)
qgmceeeqvariawfyyhdgltqseisdrlgltrlkvsrllekghqsgiirvqinsrfeg
cleyetqlrrqfslqhvrvipgladadvggrlgigaahmlmsllqpqqmlaigfgeatmn
tlqrlsgfissqqirlvtlsggvgsymtgigqlnaacsvniipaplrassadiartlkne
ncvkdvllaaqaadvaivgigavsqqddatiirsgyisqgeqlmigrkgavgdilgyffd
akgdvvtnikihneliglplsalktipvrvgvaggenkaeaiaaamkggyinalvtdqdt
aaailrs