PDB entry 4l39

View 4l39 on RCSB PDB site
Description: crystal structure of gh3.12 from arabidopsis thaliana in complex with ampcpp and salicylate
Deposited on 2013-06-05, released 2013-10-02
The last revision was dated 2018-02-07, with a file datestamp of 2018-02-02.
Experiment type: XRAY
Resolution: 2.81 Å
R-factor: N/A
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 4-substituted benzoates-glutamate ligase GH3.12
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: GH3.12, GDG1, PBS3, WIN3, At5g13320, T22N19.5, T31B5.140
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: 4-substituted benzoates-glutamate ligase GH3.12
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: GH3.12, GDG1, PBS3, WIN3, At5g13320, T22N19.5, T31B5.140
    Database cross-references and differences (RAF-indexed):
  • Heterogens: MG, SAL, APC, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4l39A (A:)
gshmasmkpifdinetfekqlkdltsnvksiqdnlleeiitpntkteylqrflidrfdke
lfkknvpivsyedikpyldrvvngessdvisartitgfllssgtsggaqkmmpwnnkyld
nltfiydlrmqvitkhvkgveegkgmmflftkqesmtpsglparvatssyfksdyfknrp
snwyysytspdevilcpnnteslychllcglvqrdevvrtgsifasvmvraievlknswe
elcsnirsghlsnwvtdlgcqnsvslvlggprpeladtieeicnqnswkgivkrlwpntk
yietvvtgsmgqyvpmlnyycndlplvsttygssettfginldplckpedvsytfmpnms
yfefipmdggdkndvvdledvklgctyepvvtnfaglyrmrvgdivlvtgfynnapqfkf
vrrenvvlsidsdktneedlfkavsqaklvlessgldlkdftsyadtstfpghyvvylev
dtkegeeketaqfeldeealstcclvmeesldnvykrcrfkdgsigpleirvvrqgtfds
lmdffisqgastgqyktprciksgkalqvletcvvakffsi

    Sequence, based on observed residues (ATOM records):
    >4l39A (A:)
etfekqlkdltsnvksiqdnlleeiitpntkteylqrflidrfdkelfkknvpivsyedi
kpyldrvvngessdvisartitgfllsaqkmmpwnnkyldnltfiydlrmqvitkhvkgv
eegkgmmflftkqesmtpsglparvatssyfksdyfknrpsnwyysytspdevilcpnnt
eslychllcglvqrdevvrtgsifasvmvraievlknsweelcsnirsghlsnwvtdlgc
qnsvslvlggprpeladtieeicnqnswkgivkrlwpntkyietvvtgsmgqyvpmlnyy
cndlplvsttygssettfginldplckpedvsytfmpnmsyfefipmdggdkndvvdled
vklgctyepvvtnfaglyrmrvgdivlvtgfynnapqfkfvrrenvvlsidsdktneedl
fkavsqaklvlessgldlkdftsyadtstfpghyvvylegeqfeldeealstcclvmees
ldnvykrcrfkdgsigpleirvvgtfdslmdffisqgqyktprckalqvletcvvakffs
i

  • Chain 'B':
    Sequence, based on SEQRES records:
    >4l39B (B:)
gshmasmkpifdinetfekqlkdltsnvksiqdnlleeiitpntkteylqrflidrfdke
lfkknvpivsyedikpyldrvvngessdvisartitgfllssgtsggaqkmmpwnnkyld
nltfiydlrmqvitkhvkgveegkgmmflftkqesmtpsglparvatssyfksdyfknrp
snwyysytspdevilcpnnteslychllcglvqrdevvrtgsifasvmvraievlknswe
elcsnirsghlsnwvtdlgcqnsvslvlggprpeladtieeicnqnswkgivkrlwpntk
yietvvtgsmgqyvpmlnyycndlplvsttygssettfginldplckpedvsytfmpnms
yfefipmdggdkndvvdledvklgctyepvvtnfaglyrmrvgdivlvtgfynnapqfkf
vrrenvvlsidsdktneedlfkavsqaklvlessgldlkdftsyadtstfpghyvvylev
dtkegeeketaqfeldeealstcclvmeesldnvykrcrfkdgsigpleirvvrqgtfds
lmdffisqgastgqyktprciksgkalqvletcvvakffsi

    Sequence, based on observed residues (ATOM records):
    >4l39B (B:)
netfekqlkdltsnvksiqdnlleeiitpntkteylqrflidrfdkelfkknvpivsyed
ikpyldrvvngessdvisartitgfllssaqkmmpwnnkyldnltfiydlrmqvitkhvk
gveegkgmmflftkqesmtpsglparvatssyfksdyfknrpsnwyysytspdevilcpn
nteslychllcglvqrdevvrtgsifasvmvraievlknsweelcsnirsghlsnwvtdl
gcqnsvslvlggprpeladtieeicnqnswkgivkrlwpntkyietvvtgsmgqyvpmln
yycndlplvsttygssettfginldplckpedvsytfmpnmsyfefipmdggdkndvvdl
edvklgctyepvvtnfaglyrmrvgdivlvtgfynnapqfkfvrrenvvlsidsdktnee
dlfkavsqaklvlesskdftsyadtstfpghyvvyleqfeldeealstcclvmeesldnv
ykrcrfkdgsigpleirvvrqgtfdslmdffistgqyktprciksgkalqvletcvvakf
fs